RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 OR56A4Q8NGH8 313 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR5M9Q8NGP3 310 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR9A1PQ8NGU1 263 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR56A3Q8NH54 315 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CEP76Q8TAP6 659 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PHOSPHO1Q8TCT1 267 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MRGPRDQ8TDS7 321 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM174Q8WUU8 243 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SNX33Q8WV41 574 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 POF1BQ8WVV4 589 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MRPS24Q96EL2 167 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PHYHIPLQ96FC7 376 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MED8Q96G25 268 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 WBP1Q96G27 269 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF668Q96K58 619 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MCCC1Q96RQ3 725 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 MTERF1Q99551 399 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CDC6Q99741 560 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CPNE1Q99829 537 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CMSS1Q9BQ75 279 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TRMOQ9BU70 441 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 GGACTQ9BVM4 153 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC29A3Q9BZD2 475 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR51J1Q9H342 316 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 DPAGT1Q9H3H5 408 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ASB8Q9H765 288 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 EVA1AQ9H8M9 152 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZBTB20Q9HC78 741 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 SPON1Q9HCB6 807 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 UBE2TQ9NPD8 197 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ABCB8Q9NUT2 735 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRMT7Q9NVM4 692 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OXSMQ9NWU1 459 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZSCAN32Q9NX65 697 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TEX10Q9NXF1 929 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 KLHL9Q9P2J3 617 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PISDQ9UG56 409 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF112Q9UJU3 913 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PACSIN3Q9UKS6 424 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 WASF3Q9UPY6 502 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CLCA2Q9UQC9 943 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 POFUT2Q9Y2G5 429 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CARHSP1Q9Y2V2 147 aaKnown RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 PCYT1BQ9Y5K3 369 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 CDH10Q9Y6N8 788 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 TIAM2Q8IVF5 1701 aa4.55□□□□□ -1.68
HMGB1P19-201ENST00000517578 OTOFQ9HC10 1997 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 RIMBP3CA6NJZ7 1639 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 RIMBP3BA6NNM3 1639 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 RIMBP3Q9UFD9 1639 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 A0A0G2JLW4 131 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 PLSCR5A0PG75 271 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 FAM74A7A6NL05 159 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 ERI2A8K979 691 aaKnown RBP4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 M0QYT0 321 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 M0R143 59 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 DLEU1O43261 78 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 TSPAN6O43657 245 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 KIAA0513O60268 411 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 SEC22BO75396 215 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 RDH16O75452 317 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC22A3O75751 556 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 VNN2O95498 520 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 MPC2O95563 127 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 MOCS2O96007 188 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 HPP00738 406 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 LTFP02788 710 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 MT-ND2P03891 347 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 FHP07954 510 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 GKN3PP0CG01 181 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 UBBP0CG47 229 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 UBCP0CG48 685 aaKnown RBP4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 STAG3L1P0CL83 205 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 NR2F1P10589 423 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 NR2C1P13056 603 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 ETS1P14921 441 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 MYOGP15173 224 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 ENGP17813 658 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 LAG3P18627 525 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 HDCP19113 662 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 ATP6V1B2P21281 511 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 UQCRC2P22695 453 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 GABRR1P24046 479 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 TACR3P29371 465 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 HOXA9P31269 272 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 CNR2P34972 360 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 THBS4P35443 961 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAP3K8P41279 467 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 MAGEA3P43357 314 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 HCCSP53701 268 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 CDH11P55287 796 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 DNAJB13P59910 316 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 ARF6P62330 175 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 RPS27AP62979 156 aaKnown RBP4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 UBA52P62987 128 aaKnown RBP4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 YWHAZP63104 245 aaKnown RBP4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 BLOC1S1P78537 153 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 DLK1P80370 383 aa4.54□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC7A9P82251 487 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms