RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FDFT1P37268 417 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SGSHP51688 502 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 FUT6P51993 359 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 AP3M2P53677 418 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 DVL1P1P54792 670 aaPredicted RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CDH4P55283 916 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 RPL24P83731 157 aaKnown RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CSTF1Q05048 431 aaKnown RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 ENPEPQ07075 957 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SPAG1Q07617 926 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 HNRNPDQ14103 355 aaKnown RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 EXT1Q16394 746 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 DUSP5Q16690 384 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PCK2Q16822 640 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 ACSF3Q4G176 576 aaPredicted RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 LINC01620Q4KN68 170 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PLPP4Q5VZY2 271 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 LRRC66Q68CR7 880 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 ATL3Q6DD88 541 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CCDC80Q76M96 950 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 EIF3MQ7L2H7 374 aaKnown RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SERINC5Q86VE9 423 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PAQR7Q86WK9 346 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CACUL1Q86Y37 369 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 TGIF2LXQ8IUE1 241 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 IQCF1Q8N6M8 205 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 C17orf47Q8NEP4 570 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 LRRC15Q8TF66 581 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PIGCQ92535 297 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 UPRTQ96BW1 309 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 RTP4Q96DX8 246 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SH3YL1Q96HL8 342 aaPredicted RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 C10orf90Q96M02 699 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 TSNARE1Q96NA8 513 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PANX1Q96RD7 426 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CHP1Q99653 195 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 POLR3FQ9H1D9 316 aaPredicted RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CPVLQ9H3G5 476 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 EHD1Q9H4M9 534 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 XKR8Q9H6D3 395 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 FKRPQ9H9S5 495 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PIPOXQ9P0Z9 390 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 RNF7Q9UBF6 113 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 GNG12Q9UBI6 72 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 GHRLQ9UBU3 117 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 GRID1Q9ULK0 1009 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SLC9A8Q9Y2E8 581 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 KLHDC2Q9Y2U9 406 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 ZHX2Q9Y6X8 837 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PRXQ9BXM0 1461 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 ERICH3Q5RHP9 1530 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 IGHV4OR15-8A0A075B7B6 117 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 A0A087WZ39 114 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 KRTAP4-8A0A0G2JLE6 195 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 A0A0J9YVX5 310 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 OR2AG2A6NM03 316 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 SRRM4A7MD48 611 aaKnown RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 CASKO14936 926 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 P2RX6O15547 441 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 TIMM8AO60220 97 aaPredicted RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 CTAG2O75638 210 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 NDUFB10O96000 172 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 KRT14P02533 472 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 HSMCR30P0CW71 290 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 NT5EP21589 574 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 LAP3P28838 519 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 SSR1P43307 286 aaKnown RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 PDLIM4P50479 330 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 TPMTP51580 245 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 PLA2G16P53816 162 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 ABCE1P61221 599 aaKnown RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 MRPS6P82932 125 aaKnown RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 LTBQ06643 244 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 MFGE8Q08431 387 aaPredicted RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 CHI3L2Q15782 390 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 SYPL1Q16563 259 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 CTSL3PQ5NE16 218 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 PDSS1Q5T2R2 415 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 C1orf189Q5VU69 101 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 TMEM207Q6UWW9 146 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 C9orf47Q6ZRZ4 202 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 BZW1Q7L1Q6 419 aaKnown RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 PARGQ86W56 976 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 TMEM17Q86X19 198 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 FAM89BQ8N5H3 189 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 COMMD1Q8N668 190 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 CD99L2Q8TCZ2 262 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 NEUROG1Q92886 237 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 MYLPFQ96A32 169 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 COQ2Q96H96 371 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 C12orf66Q96MD2 445 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 TGM7Q96PF1 710 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 LPAR4Q99677 370 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 BPIFA3Q9BQP9 254 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 TMEM204Q9BSN7 226 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 DCTN5Q9BTE1 182 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 APOOQ9BUR5 198 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 RHOJQ9H4E5 214 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 HAUS4Q9H6D7 363 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 DCTPP1Q9H773 170 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms