RNA–Protein interactions for RNA: ENST00000378748.7

OPTN-203, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-203ENST00000378748 AGAP5A6NIR3 686 aa8□□□□□ -1.13
OPTN-203ENST00000378748 H0YIV9 168 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SLC30A4O14863 429 aa8□□□□□ -1.13
OPTN-203ENST00000378748 HAT1O14929 419 aa8□□□□□ -1.13
OPTN-203ENST00000378748 HLA-DQA2P01906 255 aa8□□□□□ -1.13
OPTN-203ENST00000378748 APODP05090 189 aa8□□□□□ -1.13
OPTN-203ENST00000378748 CPMP14384 443 aa8□□□□□ -1.13
OPTN-203ENST00000378748 RHCEP18577 417 aa8□□□□□ -1.13
OPTN-203ENST00000378748 PTPN6P29350 595 aa8□□□□□ -1.13
OPTN-203ENST00000378748 CD6P30203 668 aa8□□□□□ -1.13
OPTN-203ENST00000378748 CD79BP40259 229 aa8□□□□□ -1.13
OPTN-203ENST00000378748 VSX2P58304 361 aaPredicted RBP8□□□□□ -1.13
OPTN-203ENST00000378748 PUM1Q14671 1186 aaKnown RBP eCLIP8□□□□□ -1.139e-6■■□□□ 13.5
OPTN-203ENST00000378748 CST6Q15828 149 aa8□□□□□ -1.13
OPTN-203ENST00000378748 OR4C11Q6IEV9 310 aa8□□□□□ -1.13
OPTN-203ENST00000378748 ZNF517Q6ZMY9 492 aaPredicted RBP8□□□□□ -1.13
OPTN-203ENST00000378748 CALHM3Q86XJ0 350 aa8□□□□□ -1.13
OPTN-203ENST00000378748 RAB43Q86YS6 212 aa8□□□□□ -1.13
OPTN-203ENST00000378748 NKAIN4Q8IVV8 208 aa8□□□□□ -1.13
OPTN-203ENST00000378748 LINC00471Q8N535 108 aa8□□□□□ -1.13
OPTN-203ENST00000378748 BBS1Q8NFJ9 593 aa8□□□□□ -1.13
OPTN-203ENST00000378748 RHOXF1Q8NHV9 184 aa8□□□□□ -1.13
OPTN-203ENST00000378748 CDS1Q92903 461 aa8□□□□□ -1.13
OPTN-203ENST00000378748 FKBP10Q96AY3 582 aa8□□□□□ -1.13
OPTN-203ENST00000378748 TM4SF18Q96CE8 201 aa8□□□□□ -1.13
OPTN-203ENST00000378748 HRASLS5Q96KN8 279 aa8□□□□□ -1.13
OPTN-203ENST00000378748 MAPKAP1Q9BPZ7 522 aa8□□□□□ -1.13
OPTN-203ENST00000378748 BHLHE41Q9C0J9 482 aaPredicted RBP8□□□□□ -1.13
OPTN-203ENST00000378748 DUSP21Q9H596 190 aa8□□□□□ -1.13
OPTN-203ENST00000378748 NEK6Q9HC98 313 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SMURF1Q9HCE7 757 aa8□□□□□ -1.13
OPTN-203ENST00000378748 ATP13A2Q9NQ11 1180 aa8□□□□□ -1.13
OPTN-203ENST00000378748 UGT2A1Q9Y4X1 527 aa8□□□□□ -1.13
OPTN-203ENST00000378748 NEUROG3Q9Y4Z2 214 aa8□□□□□ -1.13
OPTN-203ENST00000378748 PRRC2CQ9Y520 2896 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 TRAV27A0A087WT01 109 aa8□□□□□ -1.13
OPTN-203ENST00000378748 PRAMEF25A6NGN4 478 aa8□□□□□ -1.13
OPTN-203ENST00000378748 LRRN3E7EW58 273 aa8□□□□□ -1.13
OPTN-203ENST00000378748 RNASET2O00584 256 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 AQP9O43315 295 aa8□□□□□ -1.13
OPTN-203ENST00000378748 TIMP1P01033 207 aa8□□□□□ -1.13
OPTN-203ENST00000378748 HOXB6P17509 224 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 PCMT1P22061 227 aa8□□□□□ -1.13
OPTN-203ENST00000378748 ITPKBP27987 946 aa8□□□□□ -1.13
OPTN-203ENST00000378748 RPL3P39023 403 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 PBX2P40425 430 aa8□□□□□ -1.13
OPTN-203ENST00000378748 GCGRP47871 477 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SOX2P48431 317 aa8□□□□□ -1.13
OPTN-203ENST00000378748 RORCP51449 518 aa8□□□□□ -1.13
OPTN-203ENST00000378748 RPS25P62851 125 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 IRF4Q15306 451 aa8□□□□□ -1.13
OPTN-203ENST00000378748 TCTN3Q6NUS6 607 aa8□□□□□ -1.13
OPTN-203ENST00000378748 DPPA4Q7L190 304 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SERPINA12Q8IW75 414 aa8□□□□□ -1.13
OPTN-203ENST00000378748 OR4D11Q8NGI4 311 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SPPL3Q8TCT6 385 aa8□□□□□ -1.13
OPTN-203ENST00000378748 CHPT1Q8WUD6 406 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SIPA1Q96FS4 1042 aa8□□□□□ -1.13
OPTN-203ENST00000378748 CAMK1GQ96NX5 476 aa8□□□□□ -1.13
OPTN-203ENST00000378748 NELL2Q99435 816 aa8□□□□□ -1.13
OPTN-203ENST00000378748 TP63Q9H3D4 680 aaPredicted RBP8□□□□□ -1.13
OPTN-203ENST00000378748 LRRN3Q9H3W5 708 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SERHL2Q9H4I8 314 aa8□□□□□ -1.13
OPTN-203ENST00000378748 C1GALT1Q9NS00 363 aa8□□□□□ -1.13
OPTN-203ENST00000378748 MYEF2Q9P2K5 600 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 CRNNQ9UBG3 495 aaPredicted RBP8□□□□□ -1.13
OPTN-203ENST00000378748 MUTYHQ9UIF7 546 aa8□□□□□ -1.13
OPTN-203ENST00000378748 EXO1Q9UQ84 846 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 RPL36Q9Y3U8 105 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 PEX16Q9Y5Y5 336 aa8□□□□□ -1.13
OPTN-203ENST00000378748 HEATR5BQ9P2D3 2071 aa8□□□□□ -1.13
OPTN-203ENST00000378748 LOC102723532A0A0G2JNH3 316 aa8□□□□□ -1.13
OPTN-203ENST00000378748 GRXCR2A6NFK2 248 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SOCS6O14544 535 aa8□□□□□ -1.13
OPTN-203ENST00000378748 KIAA0355O15063 1070 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SDC3O75056 442 aa8□□□□□ -1.13
OPTN-203ENST00000378748 ZNF888P0CJ79 500 aaPredicted RBP8□□□□□ -1.13
OPTN-203ENST00000378748 HOXB2P14652 356 aa8□□□□□ -1.13
OPTN-203ENST00000378748 MMP11P24347 488 aa8□□□□□ -1.13
OPTN-203ENST00000378748 MPIP34949 423 aa8□□□□□ -1.13
OPTN-203ENST00000378748 FBXW4P57775 412 aa8□□□□□ -1.13
OPTN-203ENST00000378748 GABARAPL2P60520 117 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SHC2P98077 582 aa8□□□□□ -1.13
OPTN-203ENST00000378748 VEZF1Q14119 521 aa8□□□□□ -1.13
OPTN-203ENST00000378748 QPRTQ15274 297 aa8□□□□□ -1.13
OPTN-203ENST00000378748 AMZ1Q400G9 498 aa8□□□□□ -1.13
OPTN-203ENST00000378748 RPTNQ6XPR3 784 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SHISA6Q6ZSJ9 500 aa8□□□□□ -1.13
OPTN-203ENST00000378748 ADGRF3Q8IZF5 1079 aa8□□□□□ -1.13
OPTN-203ENST00000378748 OR56A3Q8NH54 315 aa8□□□□□ -1.13
OPTN-203ENST00000378748 DYNC2LI1Q8TCX1 351 aa8□□□□□ -1.13
OPTN-203ENST00000378748 THAP3Q8WTV1 239 aaPredicted RBP8□□□□□ -1.13
OPTN-203ENST00000378748 RAD9AQ99638 391 aa8□□□□□ -1.13
OPTN-203ENST00000378748 TPSD1Q9BZJ3 242 aa8□□□□□ -1.13
OPTN-203ENST00000378748 PLA2G12AQ9BZM1 189 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SLC7A5P2Q9GIP4 190 aa8□□□□□ -1.13
OPTN-203ENST00000378748 SPRTNQ9H040 489 aaPredicted RBP8□□□□□ -1.13
OPTN-203ENST00000378748 TMEM168Q9H0V1 697 aa8□□□□□ -1.13
OPTN-203ENST00000378748 DDX31Q9H8H2 851 aaKnown RBP8□□□□□ -1.13
OPTN-203ENST00000378748 NECTIN3Q9NQS3 549 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms