RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 NDOR1Q9UHB4 597 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 ANXA2P2A6NMY6 339 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 LIMS3P0CW19 117 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 LIMS4P0CW20 117 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 PPIBP23284 216 aaKnown RBP17.22■□□□□ 0.35
SOCS3-201ENST00000330871 PITPNBP48739 271 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 GAS1P54826 345 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 LSM11P83369 360 aaKnown RBP eCLIP17.22■□□□□ 0.35
SOCS3-201ENST00000330871 ACSM2AQ08AH3 577 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 MBTPS1Q14703 1052 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 ZNF385BQ569K4 471 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 RPS26P11Q5JNZ5 115 aaPredicted RBP17.22■□□□□ 0.35
SOCS3-201ENST00000330871 ACSM2BQ68CK6 577 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 CXCL17Q6UXB2 119 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 RBM45Q8IUH3 476 aaKnown RBP17.22■□□□□ 0.35
SOCS3-201ENST00000330871 TOMM5Q8N4H5 51 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 OR5M3Q8NGP4 307 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 CNOT9Q92600 299 aaKnown RBP17.22■□□□□ 0.35
SOCS3-201ENST00000330871 PIGKQ92643 395 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 ATG10Q9H0Y0 220 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 CYSLTR2Q9NS75 346 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 FLVCR2Q9UPI3 526 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 DOCK3Q8IZD9 2030 aa17.22■□□□□ 0.35
SOCS3-201ENST00000330871 ZNF593O00488 134 aaPredicted RBP17.21■□□□□ 0.35
SOCS3-201ENST00000330871 CLDN11O75508 207 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 RHOCP08134 193 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 PCSK2P16519 638 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 TWF1Q12792 350 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 CHIT1Q13231 466 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
SOCS3-201ENST00000330871 GINS1Q14691 196 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 DCST1Q5T197 706 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 CIDECQ96AQ7 238 aaPredicted RBP17.21■□□□□ 0.35
SOCS3-201ENST00000330871 ARHGAP9Q9BRR9 750 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 OR51B5Q9H339 312 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 ZNF768Q9H5H4 540 aaKnown RBP17.21■□□□□ 0.35
SOCS3-201ENST00000330871 C6orf47O95873 294 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 GJA1P17302 382 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 ELAVL4P26378 380 aaKnown RBP17.21■□□□□ 0.35
SOCS3-201ENST00000330871 SIM1P81133 766 aaPredicted RBP17.21■□□□□ 0.35
SOCS3-201ENST00000330871 CXorf57Q6NSI4 855 aaKnown RBP17.21■□□□□ 0.35
SOCS3-201ENST00000330871 DEF8Q6ZN54 512 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 Q6ZTK2 550 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 TECPR1Q7Z6L1 1165 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 FAM26EQ8N5C1 309 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 ADAMTS14Q8WXS8 1223 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 MRPS31Q92665 395 aaKnown RBP17.21■□□□□ 0.35
SOCS3-201ENST00000330871 YIPF5Q969M3 257 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 ASB8Q9H765 288 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 VPS29Q9UBQ0 182 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 PCDHB9Q9Y5E1 797 aa17.21■□□□□ 0.35
SOCS3-201ENST00000330871 LINC00587B1AMM8 73 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 GBAP04062 536 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ANKRD34CP0C6C1 535 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 SLC11A2P49281 568 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 FGL2Q14314 439 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ZNF791Q3KP31 576 aaPredicted RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 CTXN3Q4LDR2 81 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 NCEH1Q6PIU2 408 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ZNF454Q8N9F8 522 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 TRPV1Q8NER1 839 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ZFP3Q96NJ6 502 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 RDH14Q9HBH5 336 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ACTR10Q9NZ32 417 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ZNF282Q9UDV7 671 aaPredicted RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 BTNL2Q9UIR0 455 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 TMEM129A0AVI4 362 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 AIPO00170 330 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 SELENOFO60613 162 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ETHE1O95571 254 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 TFP02787 698 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ANXA4P09525 319 aaPredicted RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 IDSP22304 550 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 OR1G1P47890 313 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ZNF177Q13360 481 aaPredicted RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 GPRC6AQ5T6X5 926 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 PGBD2Q6P3X8 592 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 LRRC46Q96FV0 321 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 AHCYL2Q96HN2 611 aaKnown RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 EVA1AQ9H8M9 152 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 PRMT3O60678 531 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ADAM11O75078 769 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 HLA-DPB1P04440 258 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 URODP06132 367 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 LTB4RQ15722 352 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 GPR33Q49SQ1 333 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 LRRC28Q86X40 367 aaPredicted RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 SECISBP2Q96T21 854 aaKnown RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 SMAD5Q99717 465 aaKnown RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 WFDC6Q9BQY6 131 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 SYT17Q9BSW7 474 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 MVB12BQ9H7P6 319 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 C1GALT1Q9NS00 363 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 COA4Q9NYJ1 87 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 CFAP97Q9P2B7 532 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 ERVK-19Q9WJR5 959 aa17.2■□□□□ 0.34
SOCS3-201ENST00000330871 PRG3Q9Y2Y8 225 aaPredicted RBP17.2■□□□□ 0.34
SOCS3-201ENST00000330871 TRAV20A0A0B4J274 112 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms