RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 AVPR1BP47901 424 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 KCNAB2Q13303 367 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 TCTN3Q6NUS6 607 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 TMEM71Q6P5X7 295 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 CARFQ8N187 725 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 ZNF675Q8TD23 568 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 TSC22D3Q99576 134 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 EPYCQ99645 322 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 NECTIN3Q9NQS3 549 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 PRTFDC1Q9NRG1 225 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 FGF21Q9NSA1 209 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 EXD2Q9NVH0 621 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 FAM118AQ9NWS6 357 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 IFT80Q9P2H3 777 aaPredicted RBP17.19■□□□□ 0.34
USP39-201ENST00000323701 MKLN1Q9UL63 735 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 PCDHGB3Q9Y5G1 929 aa17.19■□□□□ 0.34
USP39-201ENST00000323701 DSPPQ9NZW4 1301 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 A0A087WV62 115 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 OR10H2O60403 315 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 PDE9AO76083 593 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 ALBP02768 609 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 PNLIPP16233 465 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 IGLV3-21P80748 117 aaPredicted RBP17.18■□□□□ 0.34
USP39-201ENST00000323701 SPIBQ01892 262 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 KDM4DQ6B0I6 523 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 SLC23A3Q6PIS1 610 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 C16orf62Q7Z3J2 963 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 VRK2Q86Y07 508 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 TMEM151BQ8IW70 566 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 METTL25Q8N6Q8 603 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 BBS10Q8TAM1 723 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 ZNF354BQ96LW1 612 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 TRNT1Q96Q11 434 aaKnown RBP17.18■□□□□ 0.34
USP39-201ENST00000323701 ENAMQ9NRM1 1142 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 LANCL2Q9NS86 450 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 SLC6A14Q9UN76 642 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 H0YIG0 161 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 TNFRSF11BO00300 401 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 PCDH17O14917 1159 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 SERPINB7O75635 380 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 DNAJB5O75953 348 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 IFNW1P05000 195 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 ETS2P15036 469 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 SSTR4P31391 388 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 FOXL2P58012 376 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 STX4Q12846 297 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 ANGPT1Q15389 498 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 EXOC3L2Q2M3D2 409 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 C1orf189Q5VU69 101 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 FRRS1Q6ZNA5 592 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 ZNF595Q8IYB9 648 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 VWA5B2Q8N398 1253 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 OR52R1Q8NGF1 315 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 PROX1Q92786 737 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 PIP5K1AQ99755 562 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 PRR14Q9BWN1 585 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 SYNDIG1Q9H7V2 258 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 DTX4Q9Y2E6 619 aa17.18■□□□□ 0.34
USP39-201ENST00000323701 GPR55Q9Y2T6 319 aaPredicted RBP17.18■□□□□ 0.34
USP39-201ENST00000323701 A0A0G2JPF8 293 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 CLDN24A6NM45 220 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 HNRNPCL2B2RXH8 293 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 HNRNPCL3B7ZW38 293 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 HNRNPCL4P0DMR1 293 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 MAP3K8P41279 467 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 ANXA11P50995 505 aaKnown RBP17.17■□□□□ 0.34
USP39-201ENST00000323701 SKP1P63208 163 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 KCNC4Q03721 635 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 KRT80Q6KB66 452 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 ZC3H14Q6PJT7 736 aaKnown RBP17.17■□□□□ 0.34
USP39-201ENST00000323701 EGFL6Q8IUX8 553 aa17.17■□□□□ 0.34
USP39-201ENST00000323701 IGHV5-10-1A0A0J9YXX1 117 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 FRS3O43559 492 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 CPNE6O95741 557 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 CYP4B1P13584 511 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 IGFBP5P24593 272 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 HOXD12P35452 270 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 LIMS1P48059 325 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 EMP3P54852 163 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 FAHD1Q6P587 224 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 DEF8Q6ZN54 512 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 ARHGAP22Q7Z5H3 698 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 KRT73Q86Y46 540 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 ST13P4Q8IZP2 240 aaPredicted RBP17.16■□□□□ 0.34
USP39-201ENST00000323701 RIT1Q92963 219 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 ZNF347Q96SE7 839 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 YIPF2Q9BWQ6 316 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 GXYLT2A0PJZ3 443 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 H0YAE9 185 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 ADAMDEC1O15204 470 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 RHCEP18577 417 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 AVPR2P30518 371 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 CNR2P34972 360 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 RNF144AP50876 292 aaPredicted RBP17.16■□□□□ 0.34
USP39-201ENST00000323701 IL1RL1Q01638 556 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 MAP4K2Q12851 820 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 SQSTM1Q13501 440 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 TYW3Q6IPR3 259 aaKnown RBP17.16■□□□□ 0.34
USP39-201ENST00000323701 GALNT12Q8IXK2 581 aa17.16■□□□□ 0.34
USP39-201ENST00000323701 SLC5A8Q8N695 610 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms