RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Igkv10-94A0A075B5L1 115 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Zyg11aA2BFL2 627 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr640E9Q7P5 314 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tmem265E9Q8G3 109 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm21833J3QPK1 500 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Vmn2r111K7N674 857 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 MgllO35678 303 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Cd83O88324 196 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Stfa2P35174 103 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Rad51Q08297 339 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm45902Q3UDN3 361 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Dalrd3Q6PJN8 538 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 AY358078Q6UY53 465 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Klf8Q8BLM0 355 aaKnown RBP15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Foxe1Q8R2I0 371 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr771Q8VFH6 317 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 NaaaQ9D7V9 362 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Amdhd1Q9DBA8 426 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Dpysl5Q9EQF6 564 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 Lpar2Q9JL06 348 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 HraslsQ9QZU4 167 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 CcniQ9Z2V9 377 aa15.37■□□□□ 0.05
Trim28-201ENSMUST00000005705 4930455H04RikD3Z622 58 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm8229K7N749 213 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 DhfrP00375 187 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Csn1s1P19228 313 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tia1P52912 386 aaKnown RBP15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Nanos3P60324 178 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Crybb2P62696 205 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Rps5P97461 204 aaKnown RBP15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Cdkl4Q3TZA2 342 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Havcr1Q5QNS5 305 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 P4ha2Q60716 537 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Klf4Q60793 483 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Sdc3Q64519 442 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Kiaa0513Q8R0A7 407 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr380Q8VGT3 311 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm16286Q9CQX6 220 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Loxhd1C8YR32 2068 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 VcanQ62059 3357 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm21865A0A087WRL2 222 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Glipr1l3A0A1W2P7V2 236 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Ddi2A2ADY9 399 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Ccdc7bE9Q9Y3 381 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm14139F6ZS36 494 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Rnpepl1G5E872 720 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm29394H3BIW7 199 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 H2-Q1O19441 368 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 NnmtO55239 264 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Pou3f3P31361 497 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Zswim9Q6DI92 447 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 GskipQ8BGR8 139 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Fam109aQ8BH49 266 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gemin8Q8BHE1 238 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Stfa2l1Q8BWM3 103 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 EfhbQ8CDU5 853 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gatad2aQ8CHY6 629 aaKnown RBP15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 NotumQ8R116 503 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Q9CWU4 180 aaKnown RBP15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Cmtm8Q9CZR4 173 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 9230112D13RikQ9D260 137 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 MmabQ9D273 237 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tm9sf3Q9ET30 587 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Insm2Q9JMC2 493 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Igkv18-36A0A075B5M9 114 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Zfp811A0A0J9YU71 552 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr485A0A140LJF5 317 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Cela3aA2A9U8 283 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm5072A2AHM1 344 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tnfaip1O70479 316 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Apoc3P33622 99 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Syt4P40749 425 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Efna1P52793 205 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Dvl3Q61062 716 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Fzd3Q61086 666 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 AktipQ64362 292 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Smarcd3Q6P9Z1 483 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Fbxl14Q8BID8 400 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Fbxl3Q8C4V4 428 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Rbm47Q91WT8 590 aaKnown RBP15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Slc23a2Q9EPR4 648 aa15.36■□□□□ 0.05
Trim28-201ENSMUST00000005705 Prdx4O08807 274 aaKnown RBP15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 DdostO54734 441 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Mpzl2O70255 215 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 C1orf109Q499E6 217 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gramd2bQ6PEM6 445 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Nadsyn1Q711T7 725 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr855Q7TRF8 312 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Arl15Q8BGR6 204 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Slc15a3Q8BPX9 578 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Adipor2Q8BQS5 386 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Smyd4Q8BTK5 799 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 IlvblQ8BU33 632 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Vmn1r192Q8K4C9 300 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 RbpmsQ9WVB0 197 aaKnown RBP15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Scgb2b17S4R2V3 82 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Igkv12-98A0A0G2JGF9 115 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Itga10E9Q6R1 1167 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Socs5O54928 536 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Fut4Q11127 433 aa15.35■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms