RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CCM2LQ9NUG4 571 aaPredicted RBP15.99■□□□□ 0.15
SCARB1-205ENST00000538291 NKX1-2Q9UD57 310 aaPredicted RBP15.99■□□□□ 0.15
SCARB1-205ENST00000538291 ACAD8Q9UKU7 415 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 HIF3AQ9Y2N7 669 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 A0A1W2PPK0 400 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF28P17035 718 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 RGS19P49795 217 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 SNU13P55769 128 aaKnown RBP15.99■□□□□ 0.15
SCARB1-205ENST00000538291 PHC1P78364 1004 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 CDNFQ49AH0 187 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 BLOC1S3Q6QNY0 202 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 COMMD6Q7Z4G1 85 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 CNIH3Q8TBE1 160 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 PRR11Q96HE9 360 aaPredicted RBP15.99■□□□□ 0.15
SCARB1-205ENST00000538291 BOCQ9BWV1 1114 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 TRAPPC13A5PLN9 417 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 ACTL6BO94805 426 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 MELKQ14680 651 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 BCL2L15Q5TBC7 163 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 OR52N2Q8NGI0 321 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 ALOXE3Q9BYJ1 711 aa15.99■□□□□ 0.15
SCARB1-205ENST00000538291 TRAV6A0A075B6T7 132 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 INMT-MINDY4F8WBC2 141 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 ANKRD28O15084 1053 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 CLIC3O95833 236 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 ACVR1BP36896 505 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 P2RY2P41231 377 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 EMP2P54851 167 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 MOGQ16653 247 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 LEG1Q6P5S2 330 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 AMIGO3Q86WK7 504 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 PTGDR2Q9Y5Y4 395 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 SOBPA7XYQ1 873 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 MEIS3P2A8K0S8 358 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 RSU1Q15404 277 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 SFT2D3Q587I9 215 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 TRIM73Q86UV7 250 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 MINDY1Q8N5J2 469 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 SLC5A8Q8N695 610 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 NPWQ8N729 165 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 RCBTB1Q8NDN9 531 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 C7orf43Q8WVR3 580 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 LRR1Q96L50 414 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 MAGIXQ9H6Y5 334 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 ITGB7P26010 798 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 ELK4P28324 431 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF33BQ06732 778 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 RHEBQ15382 184 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 NR0B2Q15466 257 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 DEFB133Q30KQ1 61 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 STEAP4Q687X5 459 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 PM20D1Q6GTS8 502 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 C15orf39Q6ZRI6 1047 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 SLC39A11Q8N1S5 342 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 TMEM168Q9H0V1 697 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 SRPK3Q9UPE1 567 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 SHPRHQ149N8 1683 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 AKAP12Q02952 1782 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 ARHGEF15O94989 841 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 SNAP29O95721 258 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 RPS3P23396 243 aaKnown RBP eCLIP15.98■□□□□ 0.154e-7■■■■□ 20.6
SCARB1-205ENST00000538291 KANK2Q63ZY3 851 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF551Q7Z340 670 aaPredicted RBP15.98■□□□□ 0.15
SCARB1-205ENST00000538291 CBARPQ8N350 705 aaPredicted RBP15.98■□□□□ 0.15
SCARB1-205ENST00000538291 CCDC106Q9BWC9 280 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 SYT4Q9H2B2 425 aa15.98■□□□□ 0.15
SCARB1-205ENST00000538291 ATG12O94817 140 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 RASAL1O95294 804 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 ETFAP13804 333 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 VTCN1Q7Z7D3 282 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 KLBQ86Z14 1044 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 HHIPQ96QV1 700 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 CWH43Q9H720 699 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 ACTR10Q9NZ32 417 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 SPEF2Q9C093 1822 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 A0A0J9YY10 115 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 KIAA0355O15063 1070 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 PEX14O75381 377 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 CD97P48960 835 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 CTXN1P60606 82 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 NKX3-2P78367 333 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 ZNF45Q02386 682 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 UGT2A3Q6UWM9 527 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 TRAPPC6BQ86SZ2 158 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 TTC9BQ8N6N2 239 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 KLHL15Q96M94 604 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 CLCA1A8K7I4 914 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 CEBPBP17676 345 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 HNRNPA1L2Q32P51 320 aaKnown RBP15.97■□□□□ 0.15
SCARB1-205ENST00000538291 CDRT4Q8N9R6 151 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 ANKLE1Q8NAG6 615 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 OR5AR1Q8NGP9 310 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 OR4K13Q8NH42 304 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 PHOSPHO2Q8TCD6 241 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 MS4A4EQ96PG1 132 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 CCNL2Q96S94 520 aaPredicted RBP15.97■□□□□ 0.15
SCARB1-205ENST00000538291 ARSAP15289 507 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 ARG2P78540 354 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 NPRL3Q12980 569 aa15.97■□□□□ 0.15
SCARB1-205ENST00000538291 TDGQ13569 410 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms