RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ZBP1Q9H171 429 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 LRRN3Q9H3W5 708 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CCNB1IP1Q9NPC3 277 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 EXTL2Q9UBQ6 330 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 MUTYHQ9UIF7 546 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 FBXL21Q9UKT6 434 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 HCN4Q9Y3Q4 1203 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 DOCK9Q9BZ29 2069 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 TRAV27A0A087WT01 109 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CLCA1A8K7I4 914 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 H0YAE9 185 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SCAMP2O15127 329 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 KHDRBS3O75525 346 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 LAMP2P13473 410 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ITGA2P17301 1181 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 RPS19P39019 145 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 RORCP51449 518 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF81P51508 661 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CRISP1P54107 249 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 UBE2MP61081 183 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 B4GALNT1Q00973 533 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 FGFBP1Q14512 234 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PDGFRLQ15198 375 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 TIMM50Q3ZCQ8 353 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 FAM78AQ5JUQ0 283 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 OR5M10Q6IEU7 315 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ALKBH2Q6NS38 261 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 METTL2BQ6P1Q9 378 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 HDDC2Q7Z4H3 204 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CHCHD4Q8N4Q1 142 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 AADATQ8N5Z0 425 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PAPD5Q8NDF8 572 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 OR6Q1Q8NGQ2 317 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 LCN9Q8WX39 176 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PATE1Q8WXA2 126 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 HERVK_113Q902F9 699 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PLD4Q96BZ4 506 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF607Q96SK3 696 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 AIF1LQ9BQI0 150 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 DPCDQ9BVM2 203 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 C1QTNF6Q9BXI9 259 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 REEP4Q9H6H4 257 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 MVB12BQ9H7P6 319 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 FSCN3Q9NQT6 498 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SOHLH2Q9NX45 425 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CRNNQ9UBG3 495 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 IL36AQ9UHA7 158 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 NEU3Q9UQ49 428 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 NAALAD2Q9Y3Q0 740 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SHANK1Q9Y566 2161 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 DAPL1A0PJW8 107 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 H0Y8X5 98 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CACNB4O00305 520 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 C8GP07360 202 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 JUPP14923 745 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 IMPA1P29218 277 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 RPS25P62851 125 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 E2F2Q14209 437 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 POU4F3Q15319 338 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CTF1Q16619 201 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 XKR7Q5GH72 579 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 C18orf63Q68DL7 685 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ASTLQ6HA08 431 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 THOC7Q6I9Y2 204 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 NDUFAF7Q7L592 441 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 TECPR1Q7Z6L1 1165 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 GPR149Q86SP6 731 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PDZD3Q86UT5 571 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CPA6Q8N4T0 437 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 RAB42Q8N4Z0 105 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 OR4K13Q8NH42 304 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 C16orf78Q8WTQ4 265 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 KLHL6Q8WZ60 621 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF689Q96CS4 500 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SCRN2Q96FV2 425 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SLC38A2Q96QD8 506 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 NELL2Q99435 816 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 DPH7Q9BTV6 452 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 FN3KQ9H479 309 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SMOC1Q9H4F8 434 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 CXorf36Q9H7Y0 433 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ZMAT3Q9HA38 289 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 GALNT9Q9HCQ5 603 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 POT1Q9NUX5 634 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 NDUFAF4Q9P032 175 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 NFKBIL1Q9UBC1 381 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 RPS6KB2Q9UBS0 482 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF282Q9UDV7 671 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 TMEFF2Q9UIK5 374 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 SNX7Q9UNH6 387 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 RABL2BQ9UNT1 228 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PCDHGA6Q9Y5G7 932 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 RBBP6Q7Z6E9 1792 aaKnown RBP4.72□□□□□ -1.65
CCDC39-204ENST00000476379 A0A1B0GV50 99 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 HEPACAM2A8MVW5 462 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 C11orf98E9PRG8 122 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 H7C1C5 153 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 PGRMC2O15173 223 aa4.72□□□□□ -1.65
CCDC39-204ENST00000476379 UPK1BO75841 260 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms