RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PRKD3O94806 890 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ZNF682O95780 498 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 BAG2O95816 211 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 RECKO95980 971 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 AGR2O95994 175 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 MT-CO3P00414 261 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 OPN1SWP03999 348 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 CLPSP04118 112 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SEMG1P04279 462 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 IFNA16P05015 189 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ZGLP1P0C6A0 271 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 FTH1P19P0C7X4 201 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 RAP2AP10114 183 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ACP2P11117 423 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 CDK4P11802 303 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 S1PR1P21453 382 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SSTR4P31391 388 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ETV5P41161 510 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 CLCN2P51788 898 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 CRISP3P54108 245 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 OCA2Q04671 838 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 FUT7Q11130 342 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ZNF155Q12901 538 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 EIF3IQ13347 325 aaKnown RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 ELOAQ14241 798 aaKnown RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 ELAVL1Q15717 326 aaKnown RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 SYPL1Q16563 259 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 DUSP5Q16690 384 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 FAM98BQ52LJ0 330 aaKnown RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 CRB2Q5IJ48 1285 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 HES3Q5TGS1 186 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 LCN10Q6JVE6 187 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 REEP3Q6NUK4 255 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 MRPL14Q6P1L8 145 aaKnown RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 ZCCHC12Q6PEW1 402 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 FAM198BQ6UWH4 519 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 DHRS13Q6UX07 377 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 LRRC74BQ6ZQY2 392 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SHISA6Q6ZSJ9 500 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 CBLL1Q75N03 491 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 EIF3MQ7L2H7 374 aaKnown RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 RAB11FIP2Q7L804 512 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 OVCH1Q7RTY7 1134 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ERMP1Q7Z2K6 904 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 WDR53Q7Z5U6 358 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 PATL1Q86TB9 770 aaKnown RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 PACS2Q86VP3 889 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SLC44A2Q8IWA5 706 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 PRSS58Q8IYP2 241 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 LILRA2Q8N149 483 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 METTL25Q8N6Q8 603 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ANKFN1Q8N957 763 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 CDRT4Q8N9R6 151 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SLC16A11Q8NCK7 471 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 C7orf57Q8NEG2 295 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 OR52R1Q8NGF1 315 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 STT3BQ8TCJ2 826 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 PTPMT1Q8WUK0 201 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 NRG4Q8WWG1 115 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 XAGE5Q8WWM1 108 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 HOXB13Q92826 284 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 TAMM41Q96BW9 452 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SLC47A1Q96FL8 570 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 RBM18Q96H35 190 aaKnown RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 HSH2DQ96JZ2 352 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ZNF578Q96N58 590 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 DEPDC7Q96QD5 511 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SEPHS2Q99611 448 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SPSB2Q99619 263 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 PKP2Q99959 881 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 TREX2Q9BQ50 279 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 EFHD1Q9BUP0 239 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 CNPPD1Q9BV87 410 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 DDA1Q9BW61 102 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 UGT2B28Q9BY64 529 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SLC26A1Q9H2B4 701 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 MAGIXQ9H6Y5 334 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 RUBCNLQ9H714 662 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 C6orf203Q9P0P8 240 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 IFT80Q9P2H3 777 aaPredicted RBP6.2□□□□□ -1.42
VPS41-204ENST00000413141 PISDQ9UG56 409 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 RPS6KA6Q9UK32 745 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ERVK-19Q9WJR5 959 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 ZNF451Q9Y4E5 1061 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 KCNE3Q9Y6H6 103 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 SPTBP11277 2137 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 DSPPQ9NZW4 1301 aa6.2□□□□□ -1.42
VPS41-204ENST00000413141 WDR87Q6ZQQ6 2873 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 CCDC187A0A096LP49 1063 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 SPAARA0A1B0GVQ0 90 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 A0A1W2PNU3 283 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 DUXAA6NLW8 204 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 A8MVJ9 347 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 TMEM229AB2RXF0 380 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 IDSB3KWA1 339 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PLD2O14939 933 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 CASQ2O14958 399 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 HNRNPRO43390 633 aaKnown RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 SUV39H1O43463 412 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 TPST1O60507 370 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms