RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 C7orf50Q9BRJ6 194 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 C2orf88Q9BSF0 95 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 MAGEB5Q9BZ81 275 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 BRINP2Q9C0B6 783 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 POLR1EQ9GZS1 481 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 ENKD1Q9H0I2 346 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 DUSP15Q9H1R2 295 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 OPA3Q9H6K4 179 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 TLR8Q9NR97 1041 aaKnown RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 ZFP57Q9NU63 452 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 PIGVQ9NUD9 493 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF226Q9NYT6 803 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 VSX1Q9NZR4 365 aaPredicted RBP7.09□□□□□ -1.27
CDKL5-201ENST00000379989 VAPAQ9P0L0 249 aa7.09□□□□□ -1.27
CDKL5-201ENST00000379989 A0A1W2PPE3 182 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ELOVL7A1L3X0 281 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MARCH11A6NNE9 402 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 RAD1O60671 282 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SCELO95171 688 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SLC34A2O95436 690 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 FGF4P08620 206 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PRR35P0CG20 571 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 NCF1P14598 390 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 FPR1P21462 350 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SDHBP21912 280 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 DNAJA1P31689 397 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SDC2P34741 201 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 RBP2P50120 134 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CTBP2P56545 445 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PPP3R1P63098 170 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MAJINQ3KP22 176 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ATP6AP1LQ52LC2 224 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MANEAQ5SRI9 462 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 TPGS2Q68CL5 300 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 FAHD1Q6P587 224 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ASB18Q6ZVZ8 466 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PGAP1Q75T13 922 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ZFAND4Q86XD8 727 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 OR2T11Q8NH01 316 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 NETO1Q8TDF5 533 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MARS2Q96GW9 593 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 FCRL1Q96LA6 429 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ZFP42Q96MM3 310 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 NSUN3Q9H649 340 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MID1IP1Q9NPA3 183 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 RNF19AQ9NV58 838 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CFAP97Q9P2B7 532 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 METTL1Q9UBP6 276 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 OR12D3Q9UGF7 316 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 COL4A6Q14031 1691 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 A0A087X1B8 175 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MYBPHLA2RUH7 354 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 OR6C74A6NCV1 312 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 H7C0S8 307 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 M0R129 80 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PSMD9O00233 223 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 GABRA1P14867 456 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 NPR2P20594 1047 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CTGFP29279 349 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 EVX1P49640 407 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 RENBPP51606 427 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CDH4P55283 916 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CAV3P56539 151 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CTBP1Q13363 440 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SPIN4Q56A73 249 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PCID2Q5JVF3 399 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 OR5M10Q6IEU7 315 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CDPF1Q6NVV7 123 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 METAP1DQ6UB28 335 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CNTN4Q8IWV2 1026 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SVBPQ8N300 66 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MEIOBQ8N635 442 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 RTL3Q8N8U3 475 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 POMGNT2Q8NAT1 580 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MDGA1Q8NFP4 955 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 OR8J3Q8NGG0 315 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 DTD1Q8TEA8 209 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 L3HYPDHQ96EM0 354 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PYURFQ96I23 114 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 GABARAPL3Q9BY60 117 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MRPL37Q9BZE1 423 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SIK2Q9H0K1 926 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SLC6A20Q9NP91 592 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM248Q9NWD8 314 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 TXNL4BQ9NX01 149 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 OSER1Q9NX31 292 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MS4A12Q9NXJ0 267 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PCDHB10Q9UN67 800 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PCDHB9Q9Y5E1 797 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PCDHB7Q9Y5E2 793 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 A0A1B0GTL3 188 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 LRIT2A6NDA9 550 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 URADA6NGE7 173 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 YJEFN3A6XGL0 299 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MCRIP1C9JLW8 97 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MFSD11O43934 449 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 MED6O75586 246 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 GRAP2O75791 330 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 NUDT7P0C024 238 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms