RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ANXA8P13928 327 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 CDH3P22223 829 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 MAGEA8P43361 318 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 KCNJ5P48544 419 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 RACK1P63244 317 aaKnown RBP17.47■□□□□ 0.39
HOXA9-201ENST00000343483 FUT5Q11128 374 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 AQP6Q13520 282 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 SPCS2Q15005 226 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 GPAT3Q53EU6 434 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF605Q86T29 641 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 ZBTB46Q86UZ6 589 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 TAGAPQ8N103 731 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 SVOPQ8N4V2 548 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 CADM4Q8NFZ8 388 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 OR9Q2Q8NGE9 314 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 APH1BQ8WW43 257 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF354BQ96LW1 612 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 HSPA12BQ96MM6 686 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 SEMA6CQ9H3T2 930 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 FAM60AQ9NP50 221 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 C11orf16Q9NQ32 467 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 RNF6Q9Y252 685 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 GPC6Q9Y625 555 aaPredicted RBP17.47■□□□□ 0.39
HOXA9-201ENST00000343483 KCNE3Q9Y6H6 103 aa17.47■□□□□ 0.39
HOXA9-201ENST00000343483 USP34Q70CQ2 3546 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 SCN3AQ9NY46 2000 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 ZBTB11O95625 1053 aaPredicted RBP17.46■□□□□ 0.39
HOXA9-201ENST00000343483 FADS2O95864 444 aaKnown RBP17.46■□□□□ 0.39
HOXA9-201ENST00000343483 MASP1P48740 699 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 PPM1FP49593 454 aaPredicted RBP17.46■□□□□ 0.39
HOXA9-201ENST00000343483 ID2Q02363 134 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 GNA13Q14344 377 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 KLHL35Q6PF15 583 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 DEF8Q6ZN54 512 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 GKN2Q86XP6 184 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 SAMD14Q8IZD0 417 aaPredicted RBP17.46■□□□□ 0.39
HOXA9-201ENST00000343483 SHISA5Q8N114 240 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 ARL14Q8N4G2 192 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 OR5T3Q8NGG3 340 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 BBS10Q8TAM1 723 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 MIPOL1Q8TD10 442 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 IPCEF1Q8WWN9 437 aaPredicted RBP17.46■□□□□ 0.39
HOXA9-201ENST00000343483 OR7D2Q96RA2 312 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 NIPSNAP1Q9BPW8 284 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 IL21RQ9HBE5 538 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 POFUT2Q9Y2G5 429 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 hCG_2014768A0A024R1R8 64 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 FFAR1O14842 300 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 MRPS14O60783 128 aaKnown RBP17.46■□□□□ 0.39
HOXA9-201ENST00000343483 GGT2P36268 569 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 MOGQ16653 247 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 C6orf132Q5T0Z8 1188 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 WDR53Q7Z5U6 358 aaPredicted RBP17.46■□□□□ 0.39
HOXA9-201ENST00000343483 RBM45Q8IUH3 476 aaKnown RBP17.46■□□□□ 0.39
HOXA9-201ENST00000343483 P3H2Q8IVL5 708 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 OR7G2Q8NG99 324 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 B4GALNT2Q8NHY0 566 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 EDAQ92838 391 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 ALPK1Q96QP1 1244 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 NELL2Q99435 816 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 LYRM4Q9HD34 91 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 SPACA6W5XKT8 324 aa17.46■□□□□ 0.39
HOXA9-201ENST00000343483 CCNB2O95067 398 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 INHBBP09529 407 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 POU2F1P14859 743 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 LIMS1P48059 325 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 CTF1Q16619 201 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 ZNF829Q3KNS6 432 aaPredicted RBP17.45■□□□□ 0.38
HOXA9-201ENST00000343483 MANEAQ5SRI9 462 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 FAM111BQ6SJ93 734 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 AHSA2Q719I0 299 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 PRSS48Q7RTY5 328 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 C19orf47Q8N9M1 422 aaKnown RBP17.45■□□□□ 0.38
HOXA9-201ENST00000343483 FAM81AQ8TBF8 368 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 BORCS5Q969J3 196 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 HSPBAP1Q96EW2 488 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 WFDC6Q9BQY6 131 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 TBC1D17Q9HA65 648 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 ZNF556Q9HAH1 456 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 VPS13AQ96RL7 3174 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 ZDBF2Q9HCK1 2354 aa17.45■□□□□ 0.38
HOXA9-201ENST00000343483 CLPXO76031 633 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 PSMB9P28065 219 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 HMGA2P52926 109 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 CSNK2BP67870 215 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 SHC2P98077 582 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 MVKQ03426 396 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 COLEC12Q5KU26 742 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.44■□□□□ 0.38
HOXA9-201ENST00000343483 TCTN3Q6NUS6 607 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 IQCHQ86VS3 1027 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 COMTD1Q86VU5 262 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 LACC1Q8IV20 430 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 SPEM1Q8N4L4 309 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 OR4D11Q8NGI4 311 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 GTPBP3Q969Y2 492 aaKnown RBP17.44■□□□□ 0.38
HOXA9-201ENST00000343483 SPATA5L1Q9BVQ7 753 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 QRSL1Q9H0R6 528 aaKnown RBP17.44■□□□□ 0.38
HOXA9-201ENST00000343483 PCED1AQ9H1Q7 454 aa17.44■□□□□ 0.38
HOXA9-201ENST00000343483 NMNAT1Q9HAN9 279 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms