RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 UGCGQ16739 394 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 RSPO4Q2I0M5 234 aaPredicted RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 VMACQ2NL98 169 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 PTCHD3Q3KNS1 767 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ATP13A5Q4VNC0 1218 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ELFN2Q5R3F8 820 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 BCL2L15Q5TBC7 163 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ALG1LQ6GMV1 187 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 RPL13AP3Q6NVV1 102 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ATRAIDQ6UW56 229 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 LINGO4Q6UY18 593 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 HIST3H2AQ7L7L0 130 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 DPH6Q7L8W6 267 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 CILP2Q8IUL8 1156 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 CPXM2Q8N436 756 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 FAM98AQ8NCA5 519 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 OR4C15Q8NGM1 316 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 OR5M3Q8NGP4 307 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 OR2T35Q8NGX2 323 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 OR6P1Q8NGX9 317 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 RPLP0P6Q8NHW5 317 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 SLC5A11Q8WWX8 675 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 HIST1H2ACQ93077 130 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 UBE2FQ969M7 185 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ELP4Q96EB1 424 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 CELF6Q96J87 481 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 PKMYT1Q99640 499 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ATF6BQ99941 703 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 FDXACB1Q9BRP7 624 aaPredicted RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 C2orf88Q9BSF0 95 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 CCM2Q9BSQ5 444 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 DPY30Q9C005 99 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 TMEM39BQ9GZU3 492 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 ENKD1Q9H0I2 346 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 TUBA4BQ9H853 241 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 UNKLQ9H9P5 680 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 GLOD4Q9HC38 313 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 MRPS30Q9NP92 439 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 FGF20Q9NP95 211 aaPredicted RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 SLC25A37Q9NYZ2 338 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 TSPAN16Q9UKR8 245 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 CRYL1Q9Y2S2 319 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 SF3B6Q9Y3B4 125 aaKnown RBP6.89□□□□□ -1.31
CDH1-203ENST00000561751 MICAL3Q7RTP6 2002 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 HTTP42858 3142 aa6.89□□□□□ -1.31
CDH1-203ENST00000561751 DSPPQ9NZW4 1301 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 OR2M5A3KFT3 312 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 FAM74A7A6NL05 159 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 C5orf58C9J3I9 102 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 J3KR12 359 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 TNFRSF11BO00300 401 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 PRAMEF2O60811 474 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 GADD45GO95257 159 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 MT-CO1P00395 513 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 SOD1P00441 154 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 HLA-DPB1P04440 258 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 ICAM1P05362 532 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 GLAP06280 429 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 NR2F6P10588 404 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 ARSAP15289 507 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 ZNF8P17098 575 aaPredicted RBP6.88□□□□□ -1.31
CDH1-203ENST00000561751 ERCC2P18074 760 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 NPR2P20594 1047 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 PRPH2P23942 346 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 BTCP35070 178 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 ACTR1BP42025 376 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 PITPNBP48739 271 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 RGS4P49798 205 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 MMP15P51511 669 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 STAT5BP51692 787 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 GTF2A2P52657 109 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 CAPZA1P52907 286 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 PLK1P53350 603 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 CLDN8P56748 225 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 SEC61A1P61619 476 aaKnown RBP6.88□□□□□ -1.31
CDH1-203ENST00000561751 BDH1Q02338 343 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 DSC2Q02487 901 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 TAP2Q03519 686 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 CACNB2Q08289 660 aaPredicted RBP6.88□□□□□ -1.31
CDH1-203ENST00000561751 C2orf80Q0P641 193 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 CDH18Q13634 790 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 MBTPS1Q14703 1052 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 TMEM44Q2T9K0 475 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 FAM74A3Q4VXF1 159 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 RAB6CQ53S08 254 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 NKAPLQ5M9Q1 402 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 LDLRAD1Q5T700 205 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 ATPAF1Q5TC12 328 aaPredicted RBP6.88□□□□□ -1.31
CDH1-203ENST00000561751 VASNQ6EMK4 673 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 RAET1GQ6H3X3 334 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 FRMPD2BQ6IN97 320 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 KIAA1211LQ6NV74 962 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 SLC30A6Q6NXT4 461 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 SUSD1Q6UWL2 747 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 KANSL1Q7Z3B3 1105 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 OAFQ86UD1 273 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 PDZD3Q86UT5 571 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 TPRA1Q86W33 373 aa6.88□□□□□ -1.31
CDH1-203ENST00000561751 SYNPOQ8N3V7 929 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms