RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 KCNK16Q96T55 309 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 LITAFQ99732 161 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PKP2Q99959 881 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 DDX50Q9BQ39 737 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 SYT15Q9BQS2 421 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 LAT2Q9GZY6 243 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 LHX5Q9H2C1 402 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 C10orf88Q9H8K7 445 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 MAGEF1Q9HAY2 307 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 KCNK13Q9HB14 408 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 LY9Q9HBG7 655 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 SYTL2Q9HCH5 934 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PALMDQ9NP74 551 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 NMRK1Q9NWW6 199 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 PKD2L2Q9NZM6 624 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 TSPAN16Q9UKR8 245 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 NUP50Q9UKX7 468 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 WDR83OSQ9Y284 106 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 STRAPQ9Y3F4 350 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 CSNK1G3Q9Y6M4 447 aa2.89□□□□□ -1.95
USP28-210ENST00000542033 RPRD2Q5VT52 1461 aaKnown RBP2.89□□□□□ -1.95
USP28-210ENST00000542033 EPRSP07814 1512 aaKnown RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 POLR3AO14802 1390 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 MSH6P52701 1360 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 USP47Q96K76 1375 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 HEG1Q9ULI3 1381 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PLXNC1O60486 1568 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 SAMD9Q5K651 1589 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 BCL9O00512 1426 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 POGZQ7Z3K3 1410 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 LOC390937A0A1W2PQ73 354 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 C5orf51A6NDU8 294 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 SMCO2A6NFE2 343 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ARGFXA6NJG6 315 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 TRPC5OSA6NMA1 111 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 F8VVB4 439 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 F8VWA3 439 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 RASGRF2O14827 1237 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 MAGEB3O15480 346 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PI15O43692 258 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 SSX5O60225 188 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 NOL3O60936 208 aaKnown RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 HSF2BPO75031 334 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 CGAP01215 116 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 APOHP02749 345 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 OPN1LWP04000 364 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 FRMD6-AS1P0C7T7 363 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 STAG3L1P0CL83 205 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 KRT5P13647 590 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 POU2F1P14859 743 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 GNB3P16520 340 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 HOXB8P17481 243 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 CYP3A5P20815 502 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ALDH4A1P30038 563 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 HLA-FP30511 346 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PCK1P35558 622 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 POU3F4P49335 361 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 IST1P53990 364 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 RAB4BP61018 213 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 HERV-K104P61576 105 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 GNB1P62873 340 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 HNRNPDQ14103 355 aaKnown RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 DMC1Q14565 340 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 CYTH1Q15438 398 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 DPYSL2Q16555 572 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ACKR1Q16570 336 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 AANATQ16613 207 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PHKG1Q16816 387 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PARP6Q2NL67 630 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 CNPY1Q3B7I2 92 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ITPRIPL2Q3MIP1 535 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PHLDA2Q53GA4 152 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 LYSMD4Q5XG99 296 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 KCTD16Q68DU8 428 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 SPOPLQ6IQ16 392 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 FAM166AQ6J272 317 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 NIPAL1Q6NVV3 410 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PRMT9Q6P2P2 845 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 MFSD7Q6UXD7 560 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 UTS2BQ765I0 119 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 GPR141Q7Z602 305 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 LRRC34Q8IZ02 419 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 APCDD1Q8J025 514 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 LINC00518Q8N0U6 118 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ARFGAP2Q8N6H7 521 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 NIPA2Q8N8Q9 360 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 NOA1Q8NC60 698 aaKnown RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 TRPV1Q8NER1 839 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 OR4K1Q8NGD4 311 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 OR56B2PQ8NGI1 322 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ZNF461Q8TAF7 563 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PHOSPHO2Q8TCD6 241 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 AGR3Q8TD06 166 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 RNASE8Q8TDE3 154 aaKnown RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 PYROXD1Q8WU10 500 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 RNF139Q8WU17 664 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PHLDA1Q8WV24 401 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 RAB7BQ96AH8 199 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms