RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 SDC4P31431 198 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 HIBADHP31937 336 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 GPX4P36969 197 aaPredicted RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 CRYBB2P43320 205 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SRP9P49458 86 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 DNA2P51530 1060 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 ARHGDIAP52565 204 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 PKNOX1P55347 436 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SOX8P57073 446 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SNX16P57768 344 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 KRTAP10-6P60371 365 aaPredicted RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 RAP1BP61224 184 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 RPS7P62081 194 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 RAP1AP62834 184 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SKP1P63208 163 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 ARID5AQ03989 594 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 RALGDSQ12967 914 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 CSTF3Q12996 717 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 IL10RAQ13651 578 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 DDX39BQ13838 428 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 HMGN3Q15651 99 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 MEP1AQ16819 746 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 PNLIPRP3Q17RR3 467 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 FAM83EQ2M2I3 478 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 XKR9Q5GH70 373 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 ARL13AQ5H913 290 aaPredicted RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 TECRLQ5HYJ1 363 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 METTL24Q5JXM2 366 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 RIPPLY2Q5TAB7 128 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 FAM171A1Q5VUB5 890 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 TMEM236Q5W0B7 351 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 TBC1D3CQ6IPX1 549 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 TCEAL6Q6IPX3 200 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 ANKRD54Q6NXT1 300 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 DLK2Q6UY11 383 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 TMPRSS11AQ6ZMR5 421 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 LRRC8DQ7L1W4 858 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 MRGPREQ86SM8 312 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 FJX1Q86VR8 437 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 ANKRD46Q86W74 232 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 PRIMA1Q86XR5 153 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 TBC1D3Q8IZP1 549 aaPredicted RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 MIER2Q8N344 545 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 PRR18Q8N4B5 295 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 MS4A15Q8N5U1 240 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 DTX3Q8N9I9 347 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 HIPK4Q8NE63 616 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 ZNF548Q8NEK5 533 aaPredicted RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 OR4K2Q8NGD2 314 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 OR8D4Q8NGM9 314 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 NKD1Q969G9 470 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SLC22A18Q96BI1 424 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 CERS2Q96G23 380 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 NARS2Q96I59 477 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 LINC00052Q96N35 136 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SFXN2Q96NB2 322 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 FYTTD1Q96QD9 318 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 VAT1Q99536 393 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 TEAD3Q99594 435 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 TMEM47Q9BQJ4 181 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SYT17Q9BSW7 474 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 B3GNT5Q9BYG0 378 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 HAPLN2Q9GZV7 340 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 METTL8Q9H825 291 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 NOX3Q9HBY0 568 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 STARD7Q9NQZ5 370 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SPHK1Q9NYA1 384 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 MED11Q9P086 117 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 PLEKHB1Q9UF11 243 aaPredicted RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 NUFIP1Q9UHK0 495 aaKnown RBP2.14□□□□□ -2.07
CAST-226ENST00000509529 ZDHHC2Q9UIJ5 367 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 FEM1BQ9UK73 627 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 ZDHHC8Q9ULC8 765 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 MGAT4AQ9UM21 535 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SCML1Q9UN30 329 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 SNX6Q9UNH7 406 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 TNFSF13BQ9Y275 285 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 KLHL20Q9Y2M5 609 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 PRKAB1Q9Y478 270 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 PSAT1Q9Y617 370 aa2.14□□□□□ -2.07
CAST-226ENST00000509529 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 A0A1B0GW64 132 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 BTN3A3O00478 584 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 WNT9AO14904 365 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 CASKO14936 926 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TGOLN2O43493 480 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TPST2O60704 377 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ATG12O94817 140 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 KDM4BO94953 1096 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 AHSA1O95433 338 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 EPHX1P07099 455 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ZSCAN5DPP0CG00 497 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 UBBP0CG47 229 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 UBCP0CG48 685 aaKnown RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 SLC35E2BP0CK96 405 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 CSF2RAP15509 400 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 VEGFAP15692 232 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 IL7RP16871 459 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 GJA1P17302 382 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms