RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 AEBP2Q6ZN18 517 aaPredicted RBP12.28□□□□□ -0.44
CAST-226ENST00000509529 CHIC1Q5VXU3 224 aa11.41□□□□□ -0.58
CAST-226ENST00000509529 SENP3Q9H4L4 574 aaPredicted RBP10.47□□□□□ -0.73
CAST-226ENST00000509529 PHF23Q9BUL5 403 aaPredicted RBP10.31□□□□□ -0.76
CAST-226ENST00000509529 FOXD1Q16676 465 aa9.82□□□□□ -0.84
CAST-226ENST00000509529 POTEDQ86YR6 584 aa9.54□□□□□ -0.88
CAST-226ENST00000509529 MSH5O43196 834 aa9.26□□□□□ -0.93
CAST-226ENST00000509529 PIAS4Q8N2W9 510 aaPredicted RBP9.11□□□□□ -0.95
CAST-226ENST00000509529 PPP6R1Q9UPN7 881 aa8.99□□□□□ -0.97
CAST-226ENST00000509529 PLPPR3Q6T4P5 718 aa8.94□□□□□ -0.98
CAST-226ENST00000509529 ADRA2BP18089 450 aa8.93□□□□□ -0.98
CAST-226ENST00000509529 MAPK8IP2Q13387 824 aaPredicted RBP8.3□□□□□ -1.08
CAST-226ENST00000509529 DMRT2Q9Y5R5 561 aa8.27□□□□□ -1.09
CAST-226ENST00000509529 CACNB1Q02641 598 aaPredicted RBP8.13□□□□□ -1.11
CAST-226ENST00000509529 SCAF1Q9H7N4 1312 aaKnown RBP8.12□□□□□ -1.11
CAST-226ENST00000509529 DCAF8L1A6NGE4 600 aa7.96□□□□□ -1.14
CAST-226ENST00000509529 RNF39Q9H2S5 420 aa7.9□□□□□ -1.14
CAST-226ENST00000509529 HOXD11P31277 338 aaPredicted RBP7.85□□□□□ -1.15
CAST-226ENST00000509529 PPP4R3CPQ6ZMV5 832 aa7.81□□□□□ -1.16
CAST-226ENST00000509529 C1QBPQ07021 282 aaKnown RBP7.75□□□□□ -1.17
CAST-226ENST00000509529 RNF216Q9NWF9 866 aaPredicted RBP7.71□□□□□ -1.17
CAST-226ENST00000509529 CNKSR2Q8WXI2 1034 aa7.71□□□□□ -1.18
CAST-226ENST00000509529 DNAJC5BQ9UF47 199 aa7.6□□□□□ -1.19
CAST-226ENST00000509529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.48□□□□□ -1.212e-9■■■■□ 20.1
CAST-226ENST00000509529 POTEHQ6S545 545 aa7.42□□□□□ -1.22
CAST-226ENST00000509529 NCBP3Q53F19 620 aaKnown RBP7.39□□□□□ -1.23
CAST-226ENST00000509529 NPM3O75607 178 aaKnown RBP7.33□□□□□ -1.24
CAST-226ENST00000509529 U3KPZ7 1027 aaPredicted RBP7.31□□□□□ -1.24
CAST-226ENST00000509529 DSG3P32926 999 aa7.31□□□□□ -1.24
CAST-226ENST00000509529 SPINK5Q9NQ38 1064 aaPredicted RBP7.31□□□□□ -1.24
CAST-226ENST00000509529 CAPN15O75808 1086 aa7.28□□□□□ -1.24
CAST-226ENST00000509529 ABCB7O75027 752 aa7.11□□□□□ -1.27
CAST-226ENST00000509529 TRHP20396 242 aaPredicted RBP7.11□□□□□ -1.27
CAST-226ENST00000509529 SLC4A2P04920 1241 aa7.08□□□□□ -1.28
CAST-226ENST00000509529 ZNF219Q9P2Y4 722 aaPredicted RBP7.06□□□□□ -1.28
CAST-226ENST00000509529 APLP2Q06481 763 aa7.01□□□□□ -1.29
CAST-226ENST00000509529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.96□□□□□ -1.3
CAST-226ENST00000509529 KCNA4P22459 653 aa6.96□□□□□ -1.3
CAST-226ENST00000509529 HNRNPUL2Q1KMD3 747 aaKnown RBP6.96□□□□□ -1.3
CAST-226ENST00000509529 RBM42Q9BTD8 480 aaKnown RBP6.95□□□□□ -1.3
CAST-226ENST00000509529 CHRDL2Q6WN34 429 aa6.94□□□□□ -1.3
CAST-226ENST00000509529 SAMD1Q6SPF0 538 aaPredicted RBP6.92□□□□□ -1.3
CAST-226ENST00000509529 POLA2Q14181 598 aa6.85□□□□□ -1.31
CAST-226ENST00000509529 SP7Q8TDD2 431 aaPredicted RBP6.82□□□□□ -1.32
CAST-226ENST00000509529 MYCNP04198 464 aaPredicted RBP6.77□□□□□ -1.33
CAST-226ENST00000509529 AKT1S1Q96B36 256 aa6.74□□□□□ -1.33
CAST-226ENST00000509529 PIP4P2Q8N4L2 257 aa6.71□□□□□ -1.33
CAST-226ENST00000509529 REM2Q8IYK8 340 aaPredicted RBP6.69□□□□□ -1.34
CAST-226ENST00000509529 ATF5Q9Y2D1 282 aaPredicted RBP6.67□□□□□ -1.34
CAST-226ENST00000509529 HAX1O00165 279 aa6.66□□□□□ -1.34
CAST-226ENST00000509529 OSCARQ8IYS5 282 aa6.66□□□□□ -1.34
CAST-226ENST00000509529 ZBTB12Q9Y330 459 aaPredicted RBP6.65□□□□□ -1.35
CAST-226ENST00000509529 PITPNM1O00562 1244 aa6.64□□□□□ -1.35
CAST-226ENST00000509529 FXR2P51116 673 aaKnown RBP eCLIP6.61□□□□□ -1.35
CAST-226ENST00000509529 EVX2Q03828 476 aa6.59□□□□□ -1.35
CAST-226ENST00000509529 FOXD4L1Q9NU39 408 aa6.55□□□□□ -1.36
CAST-226ENST00000509529 SLC4A1APQ9BWU0 796 aaKnown RBP6.49□□□□□ -1.37
CAST-226ENST00000509529 PRKAR2AP13861 404 aaKnown RBP6.46□□□□□ -1.38
CAST-226ENST00000509529 SPDYE2BA6NHP3 402 aa6.44□□□□□ -1.38
CAST-226ENST00000509529 SPDYE6P0CI01 402 aa6.44□□□□□ -1.38
CAST-226ENST00000509529 SPDYE2Q495Y8 402 aa6.44□□□□□ -1.38
CAST-226ENST00000509529 CLEC11AQ9Y240 323 aa6.42□□□□□ -1.38
CAST-226ENST00000509529 C19orf67A6NJJ6 358 aa6.41□□□□□ -1.38
CAST-226ENST00000509529 ZBTB22O15209 634 aa6.41□□□□□ -1.38
CAST-226ENST00000509529 GABBR2O75899 941 aa6.4□□□□□ -1.39
CAST-226ENST00000509529 SPDYE1Q8NFV5 336 aaPredicted RBP6.39□□□□□ -1.39
CAST-226ENST00000509529 LHX8Q68G74 356 aa6.39□□□□□ -1.39
CAST-226ENST00000509529 FBLN2P98095 1184 aa6.37□□□□□ -1.39
CAST-226ENST00000509529 ATXN8OSP0DMR3 200 aa6.35□□□□□ -1.39
CAST-226ENST00000509529 MKRN4PQ13434 485 aaPredicted RBP6.34□□□□□ -1.39
CAST-226ENST00000509529 CHADLQ6NUI6 762 aa6.34□□□□□ -1.39
CAST-226ENST00000509529 SSUH2Q9Y2M2 353 aa6.34□□□□□ -1.39
CAST-226ENST00000509529 ZNF692Q9BU19 519 aaPredicted RBP6.32□□□□□ -1.4
CAST-226ENST00000509529 POTEIP0CG38 1075 aa6.28□□□□□ -1.4
CAST-226ENST00000509529 PRR29P0C7W0 189 aa6.25□□□□□ -1.41
CAST-226ENST00000509529 CD44P16070 742 aaKnown RBP6.23□□□□□ -1.41
CAST-226ENST00000509529 PABPN1Q86U42 306 aaKnown RBP eCLIP6.23□□□□□ -1.41
CAST-226ENST00000509529 PLSCR2Q9NRY7 297 aa6.23□□□□□ -1.41
CAST-226ENST00000509529 FARP1Q9Y4F1 1045 aaPredicted RBP6.19□□□□□ -1.42
CAST-226ENST00000509529 DCBLD2Q96PD2 775 aa6.15□□□□□ -1.42
CAST-226ENST00000509529 CLCN6P51797 869 aa6.14□□□□□ -1.43
CAST-226ENST00000509529 ZNF579Q8NAF0 562 aaKnown RBP6.12□□□□□ -1.43
CAST-226ENST00000509529 ZRANB1Q9UGI0 708 aa6.1□□□□□ -1.43
CAST-226ENST00000509529 OTUD5Q96G74 571 aa6.09□□□□□ -1.43
CAST-226ENST00000509529 GALR2O43603 387 aaPredicted RBP6.09□□□□□ -1.44
CAST-226ENST00000509529 POTEB2H3BUK9 544 aa6.07□□□□□ -1.44
CAST-226ENST00000509529 CREBZFQ9NS37 354 aa6.05□□□□□ -1.44
CAST-226ENST00000509529 POTEMA6NI47 508 aa6.04□□□□□ -1.44
CAST-226ENST00000509529 POTEGQ6S5H5 508 aa6.02□□□□□ -1.45
CAST-226ENST00000509529 PHF12Q96QT6 1004 aa6.01□□□□□ -1.45
CAST-226ENST00000509529 PELP1Q8IZL8 1130 aaKnown RBP5.99□□□□□ -1.45
CAST-226ENST00000509529 PAK3O75914 559 aaPredicted RBP5.96□□□□□ -1.45
CAST-226ENST00000509529 STAG3Q9UJ98 1225 aa5.96□□□□□ -1.46
CAST-226ENST00000509529 POTEJP0CG39 1038 aa5.94□□□□□ -1.46
CAST-226ENST00000509529 METRNQ9UJH8 293 aa5.94□□□□□ -1.46
CAST-226ENST00000509529 MNX1P50219 401 aaPredicted RBP5.93□□□□□ -1.46
CAST-226ENST00000509529 MS4A3Q96HJ5 214 aa5.92□□□□□ -1.46
CAST-226ENST00000509529 ASTLQ6HA08 431 aaPredicted RBP5.92□□□□□ -1.46
CAST-226ENST00000509529 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
CAST-226ENST00000509529 ATMINO43313 823 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms