RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 JPH2Q9BR39 696 aaPredicted RBP4.72□□□□□ -1.65
NIPBL-203ENST00000503274 TEKT3Q9BXF9 490 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 DPEP2Q9H4A9 486 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 RGS18Q9NS28 235 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 THAP10Q9P2Z0 257 aaPredicted RBP4.72□□□□□ -1.65
NIPBL-203ENST00000503274 GMEB2Q9UKD1 530 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 PLCL2Q9UPR0 1127 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 MYH9P35579 1960 aaKnown RBP4.72□□□□□ -1.65
NIPBL-203ENST00000503274 PTPRSQ13332 1948 aa4.72□□□□□ -1.65
NIPBL-203ENST00000503274 RALGAPA2Q2PPJ7 1873 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 COL4A6Q14031 1691 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 IGLV3-22A0A075B6J6 115 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 IGHV4-30-2A0A087WSY4 118 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 A8MXK9 166 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 SLC30A4O14863 429 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 MTRF1O75570 445 aaKnown RBP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 DEXIO95424 95 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 CCNE2O96020 404 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 RPLP0P05388 317 aaKnown RBP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 IL9P15248 144 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 GATA1P15976 413 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 NPBWR1P48145 328 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 SLC8A3P57103 927 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 EVCP57679 992 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 NLRP11P59045 1033 aaKnown RBP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 LMO4P61968 165 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 FOLH1Q04609 750 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 CETN1Q12798 172 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 PTK6Q13882 451 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 SPANXN4Q5MJ08 99 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 CASC4Q6P4E1 433 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 MIER3Q7Z3K6 550 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 ANKRD46Q86W74 232 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 FAM131BQ86XD5 332 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 KLHL7Q8IXQ5 586 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 ZC3H3Q8IXZ2 948 aaKnown RBP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 OR52B6Q8NGF0 335 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 CRYGNQ8WXF5 182 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 MR1Q95460 341 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 ZNF274Q96GC6 653 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 PAPOLGQ9BWT3 736 aaKnown RBP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 GCOM2Q9BZD3 368 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-203ENST00000503274 TMEM117Q9H0C3 514 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 TMEM161AQ9NX61 479 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 VPS54Q9P1Q0 977 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 KLK11Q9UBX7 282 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 PCDHGA1Q9Y5H4 931 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 MYH15Q9Y2K3 1946 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 ZDBF2Q9HCK1 2354 aa4.71□□□□□ -1.66
NIPBL-203ENST00000503274 NID2Q14112 1375 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 IGHV3-20A0A0C4DH32 117 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 ILVBLA1L0T0 632 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 MSH4O15457 936 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 MBTPS2O43462 519 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 CHMP2AO43633 222 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 SNAP91O60641 907 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 KRT3P12035 628 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 GCFC2P16383 781 aaKnown RBP4.7□□□□□ -1.66
NIPBL-203ENST00000503274 CTNNA2P26232 953 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 PIK3R1P27986 724 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 TLX1P31314 330 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-203ENST00000503274 FEN1P39748 380 aaKnown RBP4.7□□□□□ -1.66
NIPBL-203ENST00000503274 CAPGP40121 348 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 OR3A1P47881 315 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 NDST2P52849 883 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 BTG1P62324 171 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 PRKCEQ02156 737 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 NCBP1Q09161 790 aaKnown RBP4.7□□□□□ -1.66
NIPBL-203ENST00000503274 ABRQ12979 859 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 LRRC37A5PQ49AS3 106 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 OTUD6AQ7L8S5 288 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 BLIDQ8IZY5 108 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 LYG1Q8N1E2 194 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 LRRC43Q8N309 656 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 Q8N377 158 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 OR9Q2Q8NGE9 314 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 TBCKQ8TEA7 893 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 NPRL2Q8WTW4 380 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 CHPT1Q8WUD6 406 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 CCDC114Q96M63 670 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 PCDHB18PQ96TA0 734 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 SOSTQ9BQB4 213 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 MRPL9Q9BYD2 267 aaKnown RBP4.7□□□□□ -1.66
NIPBL-203ENST00000503274 TRIM6Q9C030 488 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-203ENST00000503274 SPG21Q9NZD8 308 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 NLRC5Q86WI3 1866 aa4.7□□□□□ -1.66
NIPBL-203ENST00000503274 COL4A4P53420 1690 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-203ENST00000503274 CACNA1HO95180 2353 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 A0A1W2PPR1 153 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 TRAFD1O14545 582 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 SCO2O43819 266 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 LRCH4O75427 683 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 POP4O95707 220 aaKnown RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 ACADSP16219 412 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 HOXB8P17481 243 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 OXTRP30559 389 aa4.69□□□□□ -1.66
NIPBL-203ENST00000503274 QARSP47897 775 aaKnown RBP4.69□□□□□ -1.66
NIPBL-203ENST00000503274 GPC3P51654 580 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms