RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CKAP4Q07065 602 aaKnown RBP14.62□□□□□ -0.07
MUC1-220ENST00000498431 FUT7Q11130 342 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 SETDB1Q15047 1291 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 NNATQ16517 81 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 WHAMMP3Q1A5X7 153 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 HLA-DQA1Q5Y7H0 255 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 ANGPTL8Q6UXH0 198 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 CMC1Q7Z7K0 106 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 ADGRE4PQ86SQ3 457 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 GALNT12Q8IXK2 581 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 TEX9Q8N6V9 391 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 ISL2Q96A47 359 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 INTS12Q96CB8 462 aaKnown RBP14.62□□□□□ -0.07
MUC1-220ENST00000498431 CPNE1Q99829 537 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 CENPKQ9BS16 269 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 NXF5Q9H1B4 397 aaKnown RBP14.62□□□□□ -0.07
MUC1-220ENST00000498431 OR10A5Q9H207 317 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 GALNT9Q9HCQ5 603 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 ADGRE2Q9UHX3 823 aa14.62□□□□□ -0.07
MUC1-220ENST00000498431 CSPG4Q6UVK1 2322 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 COL6A5A8TX70 2615 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 LRRC14BA6NHZ5 514 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 CCDC188H7C350 402 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 ACTL6AO96019 429 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 ABCB1P08183 1280 aaPredicted RBP14.61□□□□□ -0.07
MUC1-220ENST00000498431 MTHFD2P13995 350 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 EPB42P16452 691 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 S1PR1P21453 382 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 GPX3P22352 226 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 PTGDSP41222 190 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 NRG3P56975 720 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 CYP20A1Q6UW02 462 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 OR1J4Q8NGS1 313 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 STAG3L4Q8TBR4 150 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 Q96MF0 132 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 NODALQ96S42 347 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 SFXN3Q9BWM7 321 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 METTL7AQ9H8H3 244 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 SERHLQ9NQF3 203 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 C6orf203Q9P0P8 240 aaPredicted RBP14.61□□□□□ -0.07
MUC1-220ENST00000498431 TXNDC16Q9P2K2 825 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 FETUBQ9UGM5 382 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 MAPRE3Q9UPY8 281 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 TSC22D4Q9Y3Q8 395 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 TESMINQ9Y4I5 508 aa14.61□□□□□ -0.07
MUC1-220ENST00000498431 ANK3Q12955 4377 aaKnown RBP14.61□□□□□ -0.07
MUC1-220ENST00000498431 TCRBV9S1A1TA0A576 114 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 EFCAB8A8MWE9 144 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 H0Y3Z8 333 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 SNPHO15079 494 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 SMAD7O15105 426 aaKnown RBP14.6□□□□□ -0.07
MUC1-220ENST00000498431 ARHGEF9O43307 516 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 KERAO60938 352 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 RCBTB2O95199 551 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 CPN1P15169 458 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 PTX3P26022 381 aaPredicted RBP14.6□□□□□ -0.07
MUC1-220ENST00000498431 GP5P40197 560 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 NEK2P51955 445 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 ARFIP1P53367 373 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 ILF2Q12905 390 aaKnown RBP14.6□□□□□ -0.07
MUC1-220ENST00000498431 CBLBQ13191 982 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 OR52E8Q6IFG1 317 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 P3H2Q8IVL5 708 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 SIMC1Q8NDZ2 872 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 RDH11Q8TC12 318 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 HGDQ93099 445 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 WDR41Q9HAD4 459 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 CLCF1Q9UBD9 225 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 SNX24Q9Y343 169 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 PCDHGA11Q9Y5H2 935 aa14.6□□□□□ -0.07
MUC1-220ENST00000498431 FAM159BA6NKW6 160 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 FAM171A2A8MVW0 826 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 A8MXE2 369 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 H0YIV9 168 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 SMPD2O60906 423 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 ICOSLGO75144 302 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 PPM1BO75688 479 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 CNTFP26441 200 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 PIK3R1P27986 724 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 PIK3CGP48736 1102 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 STARP49675 285 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 RPP38P78345 283 aaKnown RBP14.59□□□□□ -0.07
MUC1-220ENST00000498431 MRPS25P82663 173 aaKnown RBP14.59□□□□□ -0.07
MUC1-220ENST00000498431 CUL3Q13618 768 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 CPSF6Q16630 551 aaKnown RBP eCLIP14.59□□□□□ -0.07
MUC1-220ENST00000498431 LIPJQ5W064 366 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 ZNF572Q7Z3I7 529 aaPredicted RBP14.59□□□□□ -0.07
MUC1-220ENST00000498431 TRIM42Q8IWZ5 723 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 WDSUB1Q8N9V3 476 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 C17orf47Q8NEP4 570 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 SPATA4Q8NEY3 305 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 WDR20Q8TBZ3 569 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 PYROXD1Q8WU10 500 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 CDKL2Q92772 493 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 NXNL1Q96CM4 212 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 ZFP3Q96NJ6 502 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 TM9SF2Q99805 663 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 OSBPL11Q9BXB4 747 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 ACTR8Q9H981 624 aa14.59□□□□□ -0.07
MUC1-220ENST00000498431 SAYSD1Q9NPB0 183 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms