RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 IKZF3Q9UKT9 509 aa4.64□□□□□ -1.67
COPA-203ENST00000481040 RNF6Q9Y252 685 aa4.64□□□□□ -1.67
COPA-203ENST00000481040 WDR19Q8NEZ3 1342 aa4.64□□□□□ -1.67
COPA-203ENST00000481040 CCDC7Q96M83 1385 aa4.64□□□□□ -1.67
COPA-203ENST00000481040 ATP10DQ9P241 1426 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 FAM240BA0A1B0GVZ2 78 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 PRAC2D3DTV9 90 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 C16orf97H3BN30 126 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 IMPA2O14732 288 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 LCMT2O60294 686 aaKnown RBP4.63□□□□□ -1.67
COPA-203ENST00000481040 C4BPBP20851 252 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 GIFP27352 417 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 SUCLG1P53597 346 aaKnown RBP4.63□□□□□ -1.67
COPA-203ENST00000481040 RIGQ13278 110 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 RFTN2Q52LD8 501 aaPredicted RBP4.63□□□□□ -1.67
COPA-203ENST00000481040 TCHHL1Q5QJ38 904 aaPredicted RBP4.63□□□□□ -1.67
COPA-203ENST00000481040 TMEM225Q6GV28 225 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 ZSCAN25Q6NSZ9 544 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 ZNF562Q6V9R5 426 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 Q7L0L9 218 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 NET1Q7Z628 596 aaPredicted RBP4.63□□□□□ -1.67
COPA-203ENST00000481040 PARGQ86W56 976 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 FAM228AQ86W67 206 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 VSTM4Q8IW00 320 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 UBE2J2Q8N2K1 259 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 CENPSQ8N2Z9 138 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 GVQW1Q8N7I0 195 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 NIPA2Q8N8Q9 360 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 KBTBD3Q8NAB2 608 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 OR6C4Q8NGE1 309 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 OR4D10Q8NGI6 311 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 OR5M9Q8NGP3 310 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 OR13A1Q8NGR1 328 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 OR52J3Q8NH60 311 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 RPL3LQ92901 407 aaKnown RBP4.63□□□□□ -1.67
COPA-203ENST00000481040 RASD2Q96D21 266 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 HMCESQ96FZ2 354 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 ZNF354BQ96LW1 612 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 NPY6RQ99463 290 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 ALG9Q9H6U8 611 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 ATP13A3Q9H7F0 1226 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 EVA1AQ9H8M9 152 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 CRLF2Q9HC73 371 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 POLD4Q9HCU8 107 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 MAN2C1Q9NTJ4 1040 aa4.63□□□□□ -1.67
COPA-203ENST00000481040 GREB1LQ9C091 1923 aaPredicted RBP4.63□□□□□ -1.67
COPA-203ENST00000481040 TRAV26-1A0A087WT03 109 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 CD8B2A6NJW9 211 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 PCP4L1A6NKN8 68 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 OR52A4PA6NMU1 304 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 ZNF264O43296 627 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 CACNG3O60359 315 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 FCMRO60667 390 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 PAK4O96013 591 aaPredicted RBP4.62□□□□□ -1.67
COPA-203ENST00000481040 PCMT1P22061 227 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 CD38P28907 300 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 RFC2P35250 354 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 DCTP40126 519 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 RAG2P55895 527 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 MAP2K1Q02750 393 aaPredicted RBP4.62□□□□□ -1.67
COPA-203ENST00000481040 LTBQ06643 244 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 ITPK1Q13572 414 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 HAGHQ16775 308 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 WDR38Q5JTN6 314 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 PRAMEF20Q5VT98 475 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 C11orf87Q6NUJ2 197 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 FIP1L1Q6UN15 594 aaKnown RBP4.62□□□□□ -1.67
COPA-203ENST00000481040 NFE4Q86UQ8 179 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 SLC22A15Q8IZD6 547 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 NECAB1Q8N987 351 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 SYT14Q8NB59 555 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 DMBX1Q8NFW5 382 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 OR5D13Q8NGL4 314 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 LIPHQ8WWY8 451 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 DYRK2Q92630 601 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 ZNF75CPQ92670 426 aaPredicted RBP4.62□□□□□ -1.67
COPA-203ENST00000481040 NEUROG1Q92886 237 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 COQ2Q96H96 371 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 CAPNS2Q96L46 248 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 RAB18Q9NP72 206 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 SIX2Q9NPC8 291 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 GHRLQ9UBU3 117 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 TUBGCP4Q9UGJ1 667 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 GSTK1Q9Y2Q3 226 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 TTC41PQ6P2S7 1318 aa4.62□□□□□ -1.67
COPA-203ENST00000481040 LOC390937A0A1W2PQ73 354 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 ARHGEF35A5YM69 484 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 OR5H15A6NDH6 313 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 H0YIV9 168 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 CCDC159P0C7I6 412 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 PNMTP11086 282 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 PRMT2P55345 433 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 OSTNP61366 133 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 NOP14P78316 857 aaKnown RBP4.61□□□□□ -1.67
COPA-203ENST00000481040 FGL1Q08830 312 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 ZP4Q12836 540 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 TFDP1Q14186 410 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 ELAVL3Q14576 367 aaKnown RBP4.61□□□□□ -1.67
COPA-203ENST00000481040 SYPL1Q16563 259 aa4.61□□□□□ -1.67
COPA-203ENST00000481040 CAVIN4Q5BKX8 364 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms