RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RAB7BQ96AH8 199 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 LRR1Q96L50 414 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 NEDD4LQ96PU5 975 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 NELL2Q99435 816 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 DPH7Q9BTV6 452 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 KLHL20Q9Y2M5 609 aa12.88□□□□□ -0.35
BRCA1-209ENST00000470026 HEATR5BQ9P2D3 2071 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 IGKV1-8A0A0C4DH67 115 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 IRGMA1A4Y4 181 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 LRIT2A6NDA9 550 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 MAN2B1O00754 1011 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 RGS5O15539 181 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 CHRM4P08173 479 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 RPS5P46782 204 aaKnown RBP12.87□□□□□ -0.35
BRCA1-209ENST00000470026 SLC6A11P48066 632 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 GJA8P48165 433 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 SMSP52788 366 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 NKX2-5P52952 324 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-209ENST00000470026 CDK3Q00526 305 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 RUNX1T1Q06455 604 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 RAB40BQ12829 278 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 ASAH1Q13510 395 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 PLK5Q496M5 336 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 KLHL22Q53GT1 634 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 NDUFAF5Q5TEU4 345 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 FAM46CQ5VWP2 391 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 RSBN1Q5VWQ0 802 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-209ENST00000470026 HSDL2Q6YN16 418 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF793Q6ZN11 406 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 USP30Q70CQ3 517 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 KIF18BQ86Y91 864 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 SUN3Q8TAQ9 357 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 TMEM163Q8TC26 289 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 ING5Q8WYH8 240 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 TRIM43Q96BQ3 446 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-209ENST00000470026 SNX18Q96RF0 628 aa12.87□□□□□ -0.35
BRCA1-209ENST00000470026 RBMX2Q9Y388 322 aaKnown RBP12.87□□□□□ -0.35
BRCA1-209ENST00000470026 PRODHO43272 600 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 OR1F1O43749 312 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 CDRT1O95170 752 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 FGBP02675 491 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 POU2F2P09086 479 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 GAAP10253 952 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ACP2P11117 423 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 EPCAMP16422 314 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 S100A1P23297 94 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 DDOSTP39656 456 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 P2RY2P41231 377 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 WNT4P56705 351 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 LSM11P83369 360 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF234Q14588 700 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 TMEM35AQ53FP2 167 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 MRM1Q6IN84 353 aaKnown RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 CD200R1LQ6Q8B3 271 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 IQCHQ86VS3 1027 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 MMAAQ8IVH4 418 aaKnown RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF485Q8NCK3 441 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 TM9SF4Q92544 642 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 KIAA1143Q96AT1 154 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 PINK1Q9BXM7 581 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 OR2B2Q9GZK3 357 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 TP63Q9H3D4 680 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 KCNK12Q9HB15 430 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 TM7SF3Q9NS93 570 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ZCCHC3Q9NUD5 404 aaKnown RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF221Q9UK13 617 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 N6AMT1Q9Y5N5 214 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 A0A0G2JPF8 293 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 HNRNPCL2B2RXH8 293 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 HNRNPCL3B7ZW38 293 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 SYT5O00445 386 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 PPM1DO15297 605 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 HNRNPCL4P0DMR1 293 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 SLC9A3P48764 834 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 TGM4P49221 684 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ANXA11P50995 505 aaKnown RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 TAS2R38P59533 333 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 PRDX1Q06830 199 aaKnown RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 DMPKQ09013 629 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 MINDY4Q4G0A6 757 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ATAT1Q5SQI0 421 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ATAD3CQ5T2N8 411 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 XKRXQ6PP77 449 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF517Q6ZMY9 492 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 QSOX2Q6ZRP7 698 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 RAB43Q86YS6 212 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 GDPD1Q8N9F7 314 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 TTLQ8NG68 377 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 NR4A3Q92570 626 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ZNF707Q96C28 371 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-209ENST00000470026 ST6GAL2Q96JF0 529 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 FAIM2Q9BWQ8 316 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 LGR4Q9BXB1 951 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 PLA2G12AQ9BZM1 189 aa12.86□□□□□ -0.35
BRCA1-209ENST00000470026 A0A1W2PQ09 198 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 KDM4EB2RXH2 506 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-209ENST00000470026 AP3D1O14617 1153 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 KRT8P05787 483 aa12.85□□□□□ -0.35
BRCA1-209ENST00000470026 FGF9P31371 208 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-209ENST00000470026 RCVRNP35243 200 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms