RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ALPK1Q96QP1 1244 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 PELOQ9BRX2 385 aaKnown RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 MRPL1Q9BYD6 325 aaKnown RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 NOL11Q9H8H0 719 aaKnown RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 WDR41Q9HAD4 459 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 GALNT9Q9HCQ5 603 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 SNX15Q9NRS6 342 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 MTRF1LQ9UGC7 380 aaKnown RBP11.19□□□□□ -0.62
HDAC3-204ENST00000469207 PYCARDQ9ULZ3 195 aa11.19□□□□□ -0.62
HDAC3-204ENST00000469207 MBD3L4A6NDZ8 208 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 MBD3L3A6NE82 208 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 FAM187AA6NFU0 413 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 MBD3L5A6NJ08 208 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 CAPN14A8MX76 684 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 PPP6CO00743 305 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ICOSLGO75144 302 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 RAF1P04049 648 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 GPX3P22352 226 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ABCD3P28288 659 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 FEN1P39748 380 aaKnown RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ARL1P40616 181 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 STARP49675 285 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ALDH18A1P54886 795 aaKnown RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 GUCY2DQ02846 1103 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 KEAP1Q14145 624 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 PCBP2Q15366 365 aaKnown RBP eCLIP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 DEFB113Q30KQ7 82 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 TRMT12Q53H54 448 aaKnown RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 NHSL2Q5HYW2 709 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 TBCELQ5QJ74 424 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 TIGD3Q6B0B8 471 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 OR52E8Q6IFG1 317 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ANGPTL8Q6UXH0 198 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 L3MBTL4Q8NA19 623 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ADCY4Q8NFM4 1077 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 OR1J4Q8NGS1 313 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 MBD3L2Q8NHZ7 208 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 RHEBL1Q8TAI7 183 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ATP6V1E2Q96A05 226 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 PHF21BQ96EK2 531 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 TMEM41AQ96HV5 264 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 TUBA1CQ9BQE3 449 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ITPAQ9BY32 194 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 BRINP2Q9C0B6 783 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ANKRA2Q9H9E1 313 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 ZBTB26Q9HCK0 441 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 FARSBQ9NSD9 589 aaKnown RBP11.18□□□□□ -0.62
HDAC3-204ENST00000469207 JKAMPQ9P055 326 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 BCAP29Q9UHQ4 241 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 CES1P1Q9UKY3 287 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 MAPRE3Q9UPY8 281 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 IKBKGQ9Y6K9 419 aa11.18□□□□□ -0.62
HDAC3-204ENST00000469207 A0A087X1B8 175 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 A0A096LPK6 155 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 CD8B2A6NJW9 211 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 SYCE1LA8MT33 242 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 FOXE1O00358 373 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-204ENST00000469207 KLHL2O95198 593 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 CLDN9O95484 217 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 GSTA2P09210 222 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 CPMP14384 443 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 PORP16435 677 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-204ENST00000469207 TSPAN8P19075 237 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 TCEA1P23193 301 aaKnown RBP11.17□□□□□ -0.62
HDAC3-204ENST00000469207 CNTFP26441 200 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 ARFIP1P53367 373 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 NRG3P56975 720 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 ACAP2Q15057 778 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 UAP1Q16222 522 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-204ENST00000469207 FAM83EQ2M2I3 478 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 PRICKLE4Q2TBC4 344 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 CCNYL2Q5T2Q4 361 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 KRTAP1-3Q8IUG1 177 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 TRIM42Q8IWZ5 723 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 PM20D2Q8IYS1 436 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 WDSUB1Q8N9V3 476 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 HGDQ93099 445 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 INTS12Q96CB8 462 aaKnown RBP11.17□□□□□ -0.62
HDAC3-204ENST00000469207 MBD6Q96DN6 1003 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 HSPBAP1Q96EW2 488 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 LRRC46Q96FV0 321 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 G6PC3Q9BUM1 346 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 VPS11Q9H270 941 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 METTL7AQ9H8H3 244 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 CALHM2Q9HA72 323 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 SERHLQ9NQF3 203 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 PSD3Q9NYI0 1048 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 DOCK7Q96N67 2140 aa11.17□□□□□ -0.62
HDAC3-204ENST00000469207 CLCA1A8K7I4 914 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 C17orf51A8MQB3 221 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 UGT2B11O75310 529 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 ERAL1O75616 437 aaKnown RBP11.16□□□□□ -0.62
HDAC3-204ENST00000469207 PPM1BO75688 479 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 ALDOAP04075 364 aaKnown RBP11.16□□□□□ -0.62
HDAC3-204ENST00000469207 HRGP04196 525 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 TMIGD3P0DMS9 266 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-204ENST00000469207 KRT15P19012 456 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 CD53P19397 219 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 TYK2P29597 1187 aa11.16□□□□□ -0.62
HDAC3-204ENST00000469207 HOXC12P31275 282 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms