RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TIMM22Q9Y584 194 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 CREBBPQ92793 2442 aa17.82■□□□□ 0.44
USP40-207ENST00000450940 ATP6AP2A0A1C7CYW4 349 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 PCDH7O60245 1069 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 ATP6AP2O75787 350 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 TMED10P49755 219 aaKnown RBP17.81■□□□□ 0.44
USP40-207ENST00000450940 NRG3P56975 720 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 FRMD7Q6ZUT3 714 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 MCEMP1Q8IX19 187 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 CCNYL1Q8N7R7 359 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 RDH11Q8TC12 318 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 SPPL2AQ8TCT8 520 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 ZNF675Q8TD23 568 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 SDCCAG3Q96C92 435 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 APIPQ96GX9 242 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 ANGPTL4Q9BY76 406 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 NXF5Q9H1B4 397 aaKnown RBP17.81■□□□□ 0.44
USP40-207ENST00000450940 MID1IP1Q9NPA3 183 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 PNPLA3Q9NST1 481 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 COQ3Q9NZJ6 369 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 DTX4Q9Y2E6 619 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 ZNF780BQ9Y6R6 833 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 MYO9AB2RTY4 2548 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 HCFC1P51610 2035 aa17.81■□□□□ 0.44
USP40-207ENST00000450940 C19orf84I3L1E1 186 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 CDH16O75309 829 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 CBX7O95931 251 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 IL3P08700 152 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 KRT15P19012 456 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 TIA1P31483 386 aaKnown RBP eCLIP17.8■□□□□ 0.44
USP40-207ENST00000450940 GSTM5P46439 218 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 SLCO1A2P46721 670 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 MAN2A2P49641 1150 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 NAGLUP54802 743 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 FBXW4P57775 412 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 HMGCS1Q01581 520 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 SLC18A2Q05940 514 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 ACSM2AQ08AH3 577 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 CEBPEQ15744 281 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 ACSM2BQ68CK6 577 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 TRIM46Q7Z4K8 759 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 SAMD14Q8IZD0 417 aaPredicted RBP17.8■□□□□ 0.44
USP40-207ENST00000450940 RPRMLQ8N4K4 120 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 C16orf78Q8WTQ4 265 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 ASB5Q8WWX0 329 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 DIO2Q92813 273 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 ERP27Q96DN0 273 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 HSPBAP1Q96EW2 488 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 DOHHQ9BU89 302 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 SHCBP1LQ9BZQ2 653 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 BRINP2Q9C0B6 783 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 ANKZF1Q9H8Y5 726 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 OXSMQ9NWU1 459 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 EHD3Q9NZN3 535 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 UTS2RQ9UKP6 389 aa17.8■□□□□ 0.44
USP40-207ENST00000450940 ARHGAP21Q5T5U3 1957 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 TRGV5A0A0B4J1U4 118 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 SNX4O95219 450 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 ABCB1P08183 1280 aaPredicted RBP17.79■□□□□ 0.44
USP40-207ENST00000450940 COX6B1P14854 86 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 ENDOUP21128 410 aaKnown RBP17.79■□□□□ 0.44
USP40-207ENST00000450940 DRD5P21918 477 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 ACVR2AP27037 513 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 ABCD3P28288 659 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 CASP3P42574 277 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 KIR3DL1P43629 444 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 ALDH9A1P49189 494 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 EMDP50402 254 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 FOXA1P55317 472 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 DCAF7P61962 342 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 HEPACAMQ14CZ8 416 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 EXOSC7Q15024 291 aaKnown RBP17.79■□□□□ 0.44
USP40-207ENST00000450940 TRMT12Q53H54 448 aaKnown RBP17.79■□□□□ 0.44
USP40-207ENST00000450940 TMEM81Q6P7N7 255 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 ACAD11Q709F0 780 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 SIMC1Q8NDZ2 872 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 ADCY4Q8NFM4 1077 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 OR5M3Q8NGP4 307 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 LILRB4Q8NHJ6 448 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.79■□□□□ 0.44
USP40-207ENST00000450940 EPS8L3Q8TE67 593 aaKnown RBP17.79■□□□□ 0.44
USP40-207ENST00000450940 CA5BP1Q8WTZ4 195 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 RND1Q92730 232 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 SARAFQ96BY9 339 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 TREX2Q9BQ50 279 aaPredicted RBP17.79■□□□□ 0.44
USP40-207ENST00000450940 ENKD1Q9H0I2 346 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 LDAHQ9H6V9 325 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 RNF6Q9Y252 685 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 PCDHGB3Q9Y5G1 929 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 PDZD2O15018 2839 aa17.79■□□□□ 0.44
USP40-207ENST00000450940 TACC2O95359 2948 aa17.78■□□□□ 0.44
USP40-207ENST00000450940 GNG14A0A1W2PPG7 69 aa17.78■□□□□ 0.44
USP40-207ENST00000450940 FIGNL2A6NMB9 653 aa17.78■□□□□ 0.44
USP40-207ENST00000450940 ACOX3O15254 700 aa17.78■□□□□ 0.44
USP40-207ENST00000450940 PPM1BO75688 479 aa17.78■□□□□ 0.44
USP40-207ENST00000450940 HOXD4P09016 255 aaPredicted RBP17.78■□□□□ 0.44
USP40-207ENST00000450940 CPA3P15088 417 aa17.78■□□□□ 0.44
USP40-207ENST00000450940 CHRNB4P30926 498 aa17.78■□□□□ 0.44
USP40-207ENST00000450940 PPICP45877 212 aa17.78■□□□□ 0.44
USP40-207ENST00000450940 NUP107P57740 925 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms