RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CCT3P49368 545 aaKnown RBP15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 COX10Q12887 443 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 PIN1Q13526 163 aaPredicted RBP15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 PDGFRLQ15198 375 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 SYPL1Q16563 259 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 NDUFA9Q16795 377 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 SYT14P1Q58G82 188 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 ARMC4Q5T2S8 1044 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 LIPKQ5VXJ0 399 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 KIAA1211LQ6NV74 962 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 NUDT13Q86X67 352 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 WFIKKN2Q8TEU8 576 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 FGF14Q92915 247 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 MSLNLQ96KJ4 702 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 DEC1Q9P2X7 70 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 COL4A3Q01955 1670 aa15.48■□□□□ 0.07
CLCNKA-203ENST00000439316 TTC36A6NLP5 189 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 PRRT4C9JH25 899 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 M0R3H8 397 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 LAMP2P13473 410 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 CPEP16870 476 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 TCEA1P23193 301 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 MMP11P24347 488 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 CXCR2P25025 360 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 LTBRP36941 435 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 TGM4P49221 684 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 ST8SIA6P61647 398 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 RPA4Q13156 261 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 ARHGAP19Q14CB8 494 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 MLC1Q15049 377 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 GLYR1Q49A26 553 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 PARM1Q6UWI2 310 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 PRR23CQ6ZRP0 262 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 RAB43Q86YS6 212 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 CLDN22Q8N7P3 220 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 NXPE3Q969Y0 559 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 SLC35G5Q96KT7 338 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 MAN2C1Q9NTJ4 1040 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 TXNL4BQ9NX01 149 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 TEX10Q9NXF1 929 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 N6AMT1Q9Y5N5 214 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 A0A1W2PQ09 198 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 AP3D1O14617 1153 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 NDUFS4O43181 175 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 TLX2O43763 284 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 IDH3BO43837 385 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 LZTS3O60299 673 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 CDRT1O95170 752 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 OR12D1P0DN82 309 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 AZGP1P25311 298 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 DDOSTP39656 456 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 ETV5P41161 510 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 ETV1P50549 477 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 GAS1P54826 345 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 EFNB1P98172 346 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 BNC1Q01954 994 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 FLYWCH1Q4VC44 716 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 C3orf38Q5JPI3 329 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 USP30Q70CQ3 517 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 ZER1Q7Z7L7 766 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 YAF2Q8IY57 180 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 LINC00471Q8N535 108 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 ZNF582Q96NG8 517 aaPredicted RBP15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 SNX18Q96RF0 628 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 NELL2Q99435 816 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 NRTNQ99748 197 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 MIXL1Q9H2W2 232 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 OR51I1Q9H343 314 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 NT5DC2Q9H857 520 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 ADAM29Q9UKF5 820 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 MTCH2Q9Y6C9 303 aa15.47■□□□□ 0.07
CLCNKA-203ENST00000439316 F5P12259 2224 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 TCF20Q9UGU0 1960 aaKnown RBP15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 PLD2O14939 933 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 MSL3P1P0C860 447 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 TRAPPC2P0DI81 140 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 TRAPPC2BP0DI82 140 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 CCR8P51685 355 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 CDK5Q00535 292 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 ASAH1Q13510 395 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 RUNX3Q13761 415 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 GINS1Q14691 196 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 SFTPA1Q8IWL2 248 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 MORN4Q8NDC4 146 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 TMIEQ8NEW7 156 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 OR4K5Q8NGD3 323 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 TFGQ92734 400 aaPredicted RBP15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 ST6GAL2Q96JF0 529 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 LRR1Q96L50 414 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 RIPOR3Q96MK2 946 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 SLX1AQ9BQ83 275 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 RPP25Q9BUL9 199 aaKnown RBP15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 FNDC11Q9BVV2 318 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 TTYH1Q9H313 450 aaPredicted RBP15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 ZSCAN32Q9NX65 697 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 KLHL20Q9Y2M5 609 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 PRKAB1Q9Y478 270 aa15.46■□□□□ 0.07
CLCNKA-203ENST00000439316 DENND4AQ7Z401 1863 aa15.46■□□□□ 0.06
CLCNKA-203ENST00000439316 FEZF1A0PJY2 475 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 STK25O00506 426 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms