RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 UHRF1Q96T88 793 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-203ENST00000378169 PDCD10Q9BUL8 212 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 COMMD4Q9H0A8 199 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 PELI2Q9HAT8 420 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 IL37Q9NZH6 218 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 PMF1-BGLAPU3KQ54 211 aa12.52□□□□□ -0.41
NPHP4-203ENST00000378169 NPIPA5A0A0B4J1W7 369 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 TARM1B6A8C7 271 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 NPIPA7E9PJI5 369 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 C11orf98E9PRG8 122 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 NPIPA8P0DM63 369 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 SLC2A2P11168 524 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 PCGF2P35227 344 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 MAP4K2Q12851 820 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 TRIM46Q7Z4K8 759 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 ATCAYQ86WG3 371 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 GNPDA2Q8TDQ7 276 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 CNDP2Q96KP4 475 aaKnown RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 CPPED1Q9BRF8 314 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 RPRD1BQ9NQG5 326 aaKnown RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 PCDHGB7Q9Y5F8 929 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 MAGEB3O15480 346 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 GSTM2P28161 218 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 ARFIP1P53367 373 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 DTX3Q8N9I9 347 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 AVL9Q8NBF6 648 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 OR2L5Q8NG80 312 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 NECTIN4Q96NY8 510 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 HHIPQ96QV1 700 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 SAGE1Q9NXZ1 904 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 KLRF1Q9NZS2 232 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 GNG8Q9UK08 70 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 H0YIV9 168 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 J3KTA2 159 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 SCO2O43819 266 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 CXCL10P02778 98 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 HIST1H1TP22492 207 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 PFN3P60673 137 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 DSG2Q14126 1118 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 HSF5Q4G112 596 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 TMEM240Q5SV17 173 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 C1orf189Q5VU69 101 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 LINGO2Q7L985 606 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 TMEFF1Q8IYR6 380 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 CENPSQ8N2Z9 138 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 L3MBTL4Q8NA19 623 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 OR51L1Q8NGJ5 315 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 GATAD2BQ8WXI9 593 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 SEC61A2Q9H9S3 476 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 RAB36O95755 333 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 ADAP00813 363 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 C21orf33P30042 268 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 PYCR1P32322 319 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 EIF1AXP47813 144 aaKnown RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 MICAQ29983 383 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 C22orf42Q6IC83 251 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 LIN54Q6MZP7 749 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 CHERPQ8IWX8 916 aaKnown RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 C1orf216Q8TAB5 229 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 ZNF419Q96HQ0 510 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 TUBA1CQ9BQE3 449 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 SLC30A2Q9BRI3 323 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 MYNNQ9NPC7 610 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-203ENST00000378169 ALKBH4Q9NXW9 302 aa12.51□□□□□ -0.41
NPHP4-203ENST00000378169 FAM172BPA6NC97 362 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 FAM25EA8MYX2 175 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 KIAA0513O60268 411 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 SLC6A6P31641 620 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 ARHGAP19Q14CB8 494 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 CCNJQ5T5M9 372 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 MEDAGQ5VYS4 303 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-203ENST00000378169 TOE1Q96GM8 510 aaKnown RBP12.5□□□□□ -0.41
NPHP4-203ENST00000378169 SP140LQ9H930 580 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 RMI1Q9H9A7 625 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 C14orf119Q9NWQ9 140 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 ACTR10Q9NZ32 417 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 SEC14L4Q9UDX3 406 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 CD300AQ9UGN4 299 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 ING4Q9UNL4 249 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 TPRP12270 2363 aaKnown RBP12.5□□□□□ -0.41
NPHP4-203ENST00000378169 BRWD3Q6RI45 1802 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 A0A0A6YYC8 382 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-203ENST00000378169 I3L1I5 382 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-203ENST00000378169 SOX1O00570 391 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-203ENST00000378169 RDH16O75452 317 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 DCKP27707 260 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 SOX2P48431 317 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 PROX2Q3B8N5 592 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 LEXMQ3ZCV2 418 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 CBLL1Q75N03 491 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 ADIPOR2Q86V24 386 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 SPARTQ8N0X7 666 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 OR8K3Q8NH51 312 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 OR56A3Q8NH54 315 aa12.5□□□□□ -0.41
NPHP4-203ENST00000378169 RIT1Q92963 219 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms