RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 OR10S1Q8NGN2 331 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 STAG3L4Q8TBR4 150 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SKA2Q8WVK7 121 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TAPBPLQ9BX59 468 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 BRF2Q9HAW0 419 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF581Q9P0T4 197 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TESQ9UGI8 421 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 CHCHD2Q9Y6H1 151 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 LOC102723996A0A087X1L8 192 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 LRRC3CA6NJW4 275 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 HNRNPCL2B2RXH8 293 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 E5RI56 91 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF749O43361 778 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TSPAN2O60636 221 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ZCCHC18P0CG32 403 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 CD37P11049 281 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 CHMP24386 653 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 XCR1P46094 333 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 HSPA13P48723 471 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RAB28P51157 221 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 KCNK10P57789 538 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ANGPT1Q15389 498 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 IMPG1Q17R60 797 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PHYHD1Q5SRE7 291 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 DOK6Q6PKX4 331 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RPRMLQ8N4K4 120 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 OR4C6Q8NH72 309 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ULK4Q96C45 1275 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TSSK3Q96PN8 268 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PSD2Q9BQI7 771 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 CCDC28BQ9BUN5 200 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 NELFAQ9H3P2 528 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 NUDT4Q9NZJ9 180 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ZIM2Q9NZV7 527 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 HS3ST3B1Q9Y662 390 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 STX7O15400 261 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 NELFEP18615 380 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 C4BPBP20851 252 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SLBPQ14493 270 aaKnown RBP eCLIP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 LPAL2Q16609 132 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 KLHL26Q53HC5 615 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TBC1D21Q8IYX1 336 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SSC4DQ8WTU2 575 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PPP1R16AQ96I34 528 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 FBXL20Q96IG2 436 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 NRSN2Q9GZP1 204 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF768Q9H5H4 540 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 FKRPQ9H9S5 495 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SMURF2Q9HAU4 748 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ICAM5Q9UMF0 924 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TDRKHQ9Y2W6 561 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SIT1Q9Y3P8 196 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 MED13LQ71F56 2210 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 DYSFO75923 2080 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 IGHV3-20A0A0C4DH32 117 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SLCO1B7G3V0H7 640 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 VPS4BO75351 444 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 APBB3O95704 486 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 HBQ1P09105 142 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PTPN4P29074 926 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 GFRA1P56159 465 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RPS18P62269 152 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 IRX1P78414 480 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 MAD2L1Q13257 205 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ART3Q13508 389 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PRRT3Q5FWE3 981 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 UTF1Q5T230 341 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 NXNQ6DKJ4 435 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SPPL2CQ8IUH8 684 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 DEFB107AQ8IZN7 70 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 LRRC17Q8N6Y2 441 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 HGDQ93099 445 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RAB7BQ96AH8 199 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 NEURL3Q96EH8 262 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RTKNQ9BST9 563 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TRIM55Q9BYV6 548 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 CDV3Q9UKY7 258 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 NCKAP1Q9Y2A7 1128 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PCDHGA6Q9Y5G7 932 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TRBV4-1A0A0J9YWV2 114 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 KPNA5O15131 536 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 CCNDBP1O95273 360 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PRNPP04156 253 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 KLK1P06870 262 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SOX11P35716 441 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 PGM1P36871 562 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 TGM4P49221 684 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RPS15P62841 145 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 H3F3AP84243 136 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 HERC3Q15034 1050 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SULT1C3Q6IMI6 304 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 NKAIN4Q8IVV8 208 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 OR4Q3Q8NH05 313 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 GAB3Q8WWW8 586 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 ASB9Q96DX5 294 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 SPACA7Q96KW9 195 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 C17orf62Q9BQA9 187 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 GPR63Q9BZJ6 419 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 KCNN2Q9H2S1 579 aa5.19□□□□□ -1.58
TOPBP1-201ENST00000260810 RNPEPL1Q9HAU8 725 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms