RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PRODHO43272 600 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MAGP20916 626 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 HNF1BP35680 557 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CDKN2CP42773 168 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MASP1P48740 699 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 GAS1P54826 345 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TAS2R41P59536 307 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PRR5P85299 388 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CARD16Q5EG05 197 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FAM69AQ5T7M9 428 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PRAMEF8Q5VWM4 474 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PRAMEF7Q5VXH5 474 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SLC27A4Q6P1M0 643 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 DEF8Q6ZN54 512 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 C11orf96Q7Z7L8 435 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 C17orf64Q86WR6 236 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MARCH9Q86YJ5 346 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ADGRG2Q8IZP9 1017 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 OR56A1Q8NGH5 318 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 OR6F1Q8NGZ6 308 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM163Q8TC26 289 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SLC7A13Q8TCU3 470 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 AIFM2Q9BRQ8 373 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 GKN1Q9NS71 199 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MCUBQ9NWR8 336 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 NDUFB11Q9NX14 153 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CLDND1Q9NY35 253 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TVP23BQ9NYZ1 205 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 LIPT1Q9Y234 373 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TRDV1A0A1B0GX56 115 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SLC5A10A0PJK1 596 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FAM170BA6NMN3 283 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 VSTM5A8MXK1 200 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 H3BM21 787 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ARHGAP33O14559 1287 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 POLR1CO15160 346 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PCDHGA12O60330 932 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PLOD3O60568 738 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 WBP4O75554 376 aaKnown RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 KRT33AO76009 404 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 VIPP01282 170 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 CTSLP07711 333 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 HLA-EP13747 358 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FUT4P22083 530 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 KELP23276 732 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ITPKAP23677 461 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 NUDT6P53370 316 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PCBP3P57721 371 aaKnown RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RRAS2P62070 204 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 IFITM3Q01628 133 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 BDH1Q02338 343 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 STX4Q12846 297 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FOXD4Q12950 439 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ENPP2Q13822 863 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM201Q5SNT2 666 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 AGTRAPQ6RW13 159 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FAM83HQ6ZRV2 1179 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 FGD2Q7Z6J4 655 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 LRRC28Q86X40 367 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RDH10Q8IZV5 341 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 MS4A15Q8N5U1 240 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 EID2Q8N6I1 236 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ASB13Q8WXK3 278 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SLC25A46Q96AG3 418 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RAD51AP1Q96B01 352 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 HBEGFQ99075 208 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 AICDAQ9GZX7 198 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SUV39H2Q9H5I1 410 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 C11orf16Q9NQ32 467 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TIGARQ9NQ88 270 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ERVK13-1Q9NX77 482 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 NLGN3Q9NZ94 848 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 KCND3Q9UK17 655 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SPATA2Q9UM82 520 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TRAV19A0A0A6YYK7 116 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ZAR1LA6NP61 321 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 IQCF5A8MTL0 148 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 C12orf71A8MTZ7 269 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 LRRN3E7EW58 273 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TBX19O60806 448 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SRCP12931 536 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TACR1P25103 407 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RBMS1P29558 406 aaKnown RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 HOXC12P31275 282 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 VIPR1P32241 457 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 GZMKP49863 264 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 RAG2P55895 527 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 SMAD3P84022 425 aaKnown RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PTGES3Q15185 160 aaKnown RBP3.93□□□□□ -1.78
UBE4A-201ENST00000252108 UGT8Q16880 541 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ZSWIM7Q19AV6 140 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 GARNL3Q5VVW2 1013 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF730Q6ZMV8 503 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 NRARPQ7Z6K4 114 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 AMIGO1Q86WK6 493 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 NUDT13Q86X67 352 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 HS3ST5Q8IZT8 346 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TRAM1L1Q8N609 369 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 PLA2G15Q8NCC3 412 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 1300 ms