RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Mcemp1Q9D8U6 183 aa17.78■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Isoc2bQ9DCC7 210 aa17.78■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tor1aQ9ER39 333 aa17.78■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 ChmlQ9QZD5 621 aa17.78■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Vmn2r9K7N6Z8 848 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gtpbp1O08582 668 aaKnown RBP17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 JtbO88824 146 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 TstP52196 297 aaKnown RBP17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 MocosQ14CH1 862 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Pde12Q3TIU4 608 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tpgs2Q66JT5 296 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Ldoc1Q7TPY9 151 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 RhdQ8CF94 418 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Rbm12Q8R4X3 992 aaKnown RBP17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Lrrc3bQ8VCH9 259 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Olfr689Q8VG18 320 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Olfr166Q8VGX2 312 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 5330417H12RikQ9D3P2 110 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Ccdc3Q9D6Y1 273 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Dnase1l1Q9D7J6 314 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Med27Q9DB40 311 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Acot2Q9QYR9 453 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Khdrbs2Q9WU01 349 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Lcn5A2AJB7 192 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Kcnmb3E9Q7U0 239 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gm597E9Q8J5 896 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Pold1P52431 1105 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Gal3st3P61315 431 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Rps5P97461 204 aaKnown RBP17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Slc44a5Q5RJI2 710 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Bcap31Q61335 245 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Sqstm1Q64337 442 aaKnown RBP17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Abcg1Q64343 666 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Cxcl3Q6W5C0 100 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Acp6Q8BP40 418 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Sf3b4Q8QZY9 424 aaKnown RBP17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Sh3glb2Q8R3V5 400 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Olfr353Q8VGK0 311 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Olfr380Q8VGT3 311 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Dus3lQ91XI1 637 aaKnown RBP17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Dusp7Q91Z46 422 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Tmem159Q922Z1 161 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Asf1aQ9CQE6 204 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Olfr44Q9EQB8 314 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Capn10Q9ESK3 666 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Ntn4Q9JI33 628 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Insm2Q9JMC2 493 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Hspb3Q9QZ57 154 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Syt11Q9R0N3 430 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Thbs4Q9Z1T2 963 aa17.77■□□□□ 0.44
Shkbp1-201ENSMUST00000003857 Esp18A8R0V1 91 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Vmn2r106E9PY92 862 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Smim18J3QNP2 93 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Mtnd2P03893 345 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rpl7P14148 270 aaKnown RBP17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 RhoP15409 348 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Ubl4aP21126 157 aaKnown RBP17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Serpind1P49182 478 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tmprss11cQ1JRP2 431 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Itgb2lQ3UV74 738 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Olfr1418Q7TQS3 318 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Supv3l1Q80YD1 779 aaKnown RBP17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Cst13Q80ZN5 141 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Plekhn1Q8C886 359 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Cyp51a1Q8K0C4 503 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Pphln1Q8K2H1 381 aaKnown RBP17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Vmn1r75Q8R289 305 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Grip1Q925T6 1127 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tex19.2Q9D5S1 317 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Acad8Q9D7B6 413 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rex2A2AWF2 685 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Iqca1lA6H690 825 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 2610001J05RikF2Z3Y9 59 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 GlaP51569 419 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Fgf1P61148 155 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 FhP97807 507 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 C1qaP98086 245 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Acss3Q14DH7 682 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Kcnk9Q3LS21 402 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Eef2kmtQ3UZW7 335 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 ThrspQ62264 150 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 St8sia4Q64692 359 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Zc3hc1Q80YV2 501 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rspo2Q8BFU0 243 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Clrn3Q8BHH8 226 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Tgm4Q8BZH1 670 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Npsr1Q8BZP8 371 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 PpcsQ8VDG5 311 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Olfr700Q8VFM5 316 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 ScgnQ91WD9 276 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Pcdhga6Q91XY2 932 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 PlgrktQ9D3P8 147 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 LhppQ9D7I5 270 aa17.76■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Gm28576A0A087WRP6 222 aa17.75■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 KeraO35367 351 aa17.75■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Zfp28P10078 825 aa17.75■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Rpl10lP86048 214 aaKnown RBP17.75■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 CrhbpQ60571 322 aa17.75■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Gdi2Q61598 445 aaKnown RBP17.75■□□□□ 0.43
Shkbp1-201ENSMUST00000003857 Elavl4Q61701 385 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms