RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ZNF148Q9UQR1 794 aa2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 KCNK6Q9Y257 313 aa2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TDRKHQ9Y2W6 561 aaKnown RBP2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 JRKLQ9Y4A0 524 aa2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CSNK1G3Q9Y6M4 447 aa2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RNF215Q9Y6U7 377 aa2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 MAU2Q9Y6X3 613 aa2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 BAHCC1Q9P281 2608 aa2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ITPR2Q14571 2701 aa2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 USP9YO00507 2555 aaPredicted RBP2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 UBR5O95071 2799 aaPredicted RBP2.44□□□□□ -2.02
TNFRSF1A-210ENST00000537842 LRBAP50851 2863 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PTPRBP23467 1997 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PIKFYVEQ9Y2I7 2098 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SDK2Q58EX2 2172 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 LOC105369274A0A096LPK9 316 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 LOC102723532A0A0G2JNH3 316 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TRBV2A0A0J9YWF9 115 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ZCWPW2A0A1B0GU75 182 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GXYLT2A0PJZ3 443 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CPED1A4D0V7 1026 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RGSL1A5PLK6 1076 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TRABD2BA6NFA1 517 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FAM90A7PA6NKC0 464 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SDR42E2A6NKP2 422 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 C2orf81A6NN90 581 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FAM90A22PA8MWA6 464 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FAM90A12PA8MX19 464 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FAM90A23PA8MXZ1 464 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FAM25EA8MYX2 175 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 B4DGG1 531 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GOLGA8MH3BSY2 632 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CCDC188H7C350 402 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 AGPSO00116 658 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 AP4M1O00189 453 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FLRT2O43155 660 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TTI1O43156 1089 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RIPK2O43353 540 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GRID2O43424 1007 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HCRTR1O43613 425 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HCRTR2O43614 444 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TLX3O43711 291 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 POP7O75817 140 aaKnown RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 BCAS2O75934 225 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SRP72O76094 671 aaKnown RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CDK14O94921 469 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 NXPH3O95157 252 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SLC25A14O95258 325 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 OR2C1O95371 312 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GOT2P00505 430 aaKnown RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TNFP01375 233 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 IL1AP01583 271 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TUBBP07437 444 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 APRTP07741 180 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 IL6RP08887 468 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SFTPCP11686 197 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CCL4P13236 92 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ACP5P13686 325 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PRG2P13727 222 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SLC2A4P14672 509 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ZNF182P17025 639 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ZNF30P17039 623 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GABRB1P18505 474 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ITGB6P18564 788 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 WT1P19544 449 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CCNA2P20248 432 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ITGA3P26006 1051 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FOXN2P32314 431 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PTGER1P34995 402 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ETV5P41161 510 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FOLR3P41439 243 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 MAGEA4P43358 317 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RPL21P46778 160 aaKnown RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ARRB1P49407 418 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ATXN3P54252 364 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PMS2P54278 862 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GEMP55040 296 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 DCDC1P59894 354 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HNRNPKP61978 463 aaKnown RBP eCLIP2.43□□□□□ -2.029e-7■■■□□ 16.4
TNFRSF1A-210ENST00000537842 UBE2IP63279 158 aaKnown RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TUBB4BP68371 445 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 KCNJ10P78508 379 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ACVR1Q04771 509 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ZFP36L1Q07352 338 aaKnown RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CCDC15Q0P6D6 951 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 NFATC2Q13469 925 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RIPK1Q13546 671 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GRB7Q14451 532 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FASTKD3Q14CZ7 662 aaKnown RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TAF1AQ15573 450 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 MAPK11Q15759 364 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RPE65Q16518 533 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PCGF3Q3KNV8 242 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RNASEH2BQ5TBB1 312 aaKnown RBP2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HES3Q5TGS1 186 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SHEQ5VZ18 495 aa2.43□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TMEM268Q5VZI3 342 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms