RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 LIX1Q8N485 282 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 C16orf78Q8WTQ4 265 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 PMEPA1Q969W9 287 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 MARK4Q96L34 752 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 RAD21L1Q9H4I0 556 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 HMG20AQ9NP66 347 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 MYNNQ9NPC7 610 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 SDR39U1Q9NRG7 319 aaPredicted RBP11.58□□□□□ -0.56
SCARB1-204ENST00000535005 MS4A12Q9NXJ0 267 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 PHF11Q9UIL8 331 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 DAPP1Q9UN19 280 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 B3GALT1Q9Y5Z6 326 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 SEC16AO15027 2179 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 C9orf172C9J069 976 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ANKRD28O15084 1053 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 PRMT3O60678 531 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF28P17035 718 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ALAS2P22557 587 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 LIM2P55344 173 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 CLDN8P56748 225 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ADARB1P78563 741 aaKnown RBP11.58□□□□□ -0.56
SCARB1-204ENST00000535005 OCA2Q04671 838 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 EPS8Q12929 822 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 DSG2Q14126 1118 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 FAM71E1Q6IPT2 247 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 CYP2R1Q6VVX0 501 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 PTRH1Q86Y79 214 aaKnown RBP11.58□□□□□ -0.56
SCARB1-204ENST00000535005 CA13Q8N1Q1 262 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 DTWD1Q8N5C7 304 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 CLIP3Q96DZ5 547 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 DPH2Q9BQC3 489 aaPredicted RBP11.58□□□□□ -0.56
SCARB1-204ENST00000535005 EBPLQ9BY08 206 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 SLC7A5P2Q9GIP4 190 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ACTL8Q9H568 366 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF304Q9HCX3 659 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 PRDM9Q9NQV7 894 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 ZIM2Q9NZV7 527 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 NDOR1Q9UHB4 597 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 MAPRE3Q9UPY8 281 aa11.58□□□□□ -0.56
SCARB1-204ENST00000535005 TMEM184BQ9Y519 407 aaPredicted RBP11.58□□□□□ -0.56
SCARB1-204ENST00000535005 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 CROCCQ5TZA2 2017 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 PTPRBP23467 1997 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 CLDN25C9JDP6 229 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 MEN1O00255 615 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 ACOX3O15254 700 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 PROM1O43490 865 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 CHST10O43529 356 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 ABCB7O75027 752 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 DNAJB6O75190 326 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 RDH16O75452 317 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 TNFSF15O95150 251 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 HPRP00739 348 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 NTRK1P04629 796 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 GNAO1P09471 354 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 DRD2P14416 443 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 TAS2R50P59544 299 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 ABHD18Q0P651 414 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 TOP3AQ13472 1001 aaPredicted RBP11.57□□□□□ -0.56
SCARB1-204ENST00000535005 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 RPS6KA2Q15349 733 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 CYBRD1Q53TN4 286 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 RIMKLAQ8IXN7 391 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 SLC15A3Q8IY34 581 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 MIER2Q8N344 545 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 ADAMTS18Q8TE60 1221 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 CYGBQ8WWM9 190 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 MMABQ96EY8 250 aaPredicted RBP11.57□□□□□ -0.56
SCARB1-204ENST00000535005 EGLN2Q96KS0 407 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 MAPKAP1Q9BPZ7 522 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 NRSN2Q9GZP1 204 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 CCDC167Q9P0B6 97 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 ATG4BQ9Y4P1 393 aa11.57□□□□□ -0.56
SCARB1-204ENST00000535005 A0A1W2PR48 441 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF860A6NHJ4 632 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TBX19O60806 448 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 DLGAP3O95886 979 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 RNH1P13489 461 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF24P17028 368 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 PRPS1L1P21108 318 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 GPX3P22352 226 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 OR1D4P47884 311 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 RAB38P57729 211 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 DCDP81605 110 aaKnown RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ATP1A4Q13733 1029 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 PTGR1Q14914 329 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 RTP5Q14D33 572 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 NKAIN1Q4KMZ8 207 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 C1orf189Q5VU69 101 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF517Q6ZMY9 492 aaPredicted RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 MARCH9Q86YJ5 346 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 SLC15A4Q8N697 577 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 OR5T3Q8NGG3 340 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TANKQ92844 425 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 MTERF3Q96E29 417 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF764Q96H86 408 aaPredicted RBP11.56□□□□□ -0.56
SCARB1-204ENST00000535005 SLC46A1Q96NT5 459 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 TSSK3Q96PN8 268 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 FAIM2Q9BWQ8 316 aa11.56□□□□□ -0.56
SCARB1-204ENST00000535005 ULBP3Q9BZM4 244 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms