RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 ZNF704Q6ZNC4 412 aaPredicted RBP12.66□□□□□ -0.38
SMURF1-203ENST00000472627 ADGRE4PQ86SQ3 457 aa12.66□□□□□ -0.38
SMURF1-203ENST00000472627 RNF214Q8ND24 703 aa12.66□□□□□ -0.38
SMURF1-203ENST00000472627 REPS1Q96D71 796 aa12.66□□□□□ -0.38
SMURF1-203ENST00000472627 ZBED6CLQ96FA7 236 aaPredicted RBP12.66□□□□□ -0.38
SMURF1-203ENST00000472627 PGM2Q96G03 612 aa12.66□□□□□ -0.38
SMURF1-203ENST00000472627 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
SMURF1-203ENST00000472627 FANCFQ9NPI8 374 aa12.66□□□□□ -0.38
SMURF1-203ENST00000472627 PPANQ9NQ55 473 aaKnown RBP12.66□□□□□ -0.38
SMURF1-203ENST00000472627 FREM3P0C091 2139 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 NPEPPSL1A6NEC2 478 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 CBR3O75828 277 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 SCELO95171 688 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 KRT14P02533 472 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 AHSGP02765 367 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 PPP3CBP16298 524 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 GALNSP34059 522 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 SLC6A12P48065 614 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 TNFRSF17Q02223 184 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 ZNF793Q6ZN11 406 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 VN1R5Q7Z5H4 357 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 GPR180Q86V85 440 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 CNTN4Q8IWV2 1026 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 TRIM42Q8IWZ5 723 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 ZNF611Q8N823 705 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 SNX31Q8N9S9 440 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 MAPK1IP1LQ8NDC0 245 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 NAT9Q9BTE0 207 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 TSPY26PQ9H489 355 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 WDR41Q9HAD4 459 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 DNAJC11Q9NVH1 559 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 WWOXQ9NZC7 414 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 RNF112Q9ULX5 631 aa12.65□□□□□ -0.38
SMURF1-203ENST00000472627 SLC22A20A6NK97 555 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 PLOD2O00469 737 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 TBX6O95947 436 aaPredicted RBP12.64□□□□□ -0.39
SMURF1-203ENST00000472627 ZNF37AP17032 561 aaPredicted RBP12.64□□□□□ -0.39
SMURF1-203ENST00000472627 GABRB3P28472 473 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 SOX18P35713 384 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 GDF5P43026 501 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 RAP1GDS1P52306 607 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 SLAMF1Q13291 335 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 SNTA1Q13424 505 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 SPANXN3Q5MJ09 141 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 TMEM64Q6YI46 380 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 SH2D5Q6ZV89 423 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 ZNF550Q7Z398 422 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 C17orf47Q8NEP4 570 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 IGFBPL1Q8WX77 278 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 GTPBP3Q969Y2 492 aaKnown RBP12.64□□□□□ -0.39
SMURF1-203ENST00000472627 RHBDF1Q96CC6 855 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 STARD4Q96DR4 205 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 ZNF845Q96IR2 970 aaPredicted RBP12.64□□□□□ -0.39
SMURF1-203ENST00000472627 SFXN2Q96NB2 322 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 BAG1Q99933 345 aaPredicted RBP12.64□□□□□ -0.39
SMURF1-203ENST00000472627 OSBPL11Q9BXB4 747 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 MS4A8Q9BY19 250 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 OR2B2Q9GZK3 357 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 TAS2R10Q9NYW0 307 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 CTNNAL1Q9UBT7 734 aa12.64□□□□□ -0.39
SMURF1-203ENST00000472627 A0A087X1B8 175 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.63□□□□□ -0.39
SMURF1-203ENST00000472627 LRRC14BA6NHZ5 514 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 RTCAO00442 366 aaKnown RBP12.63□□□□□ -0.39
SMURF1-203ENST00000472627 HS3ST1O14792 307 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 GPR75O95800 540 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 ALDOAP04075 364 aaKnown RBP12.63□□□□□ -0.39
SMURF1-203ENST00000472627 NAGAP17050 411 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 PTMSP20962 102 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 MAGEA3P43357 314 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 EEFSECP57772 596 aaKnown RBP12.63□□□□□ -0.39
SMURF1-203ENST00000472627 IRF8Q02556 426 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 CAPRIN1Q14444 709 aaKnown RBP12.63□□□□□ -0.39
SMURF1-203ENST00000472627 PDK4Q16654 411 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 OR4C11Q6IEV9 310 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 TMEM81Q6P7N7 255 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 DGAT2L6Q6ZPD8 337 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 WDR34Q96EX3 536 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 CMTM7Q96FZ5 175 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 CERS2Q96G23 380 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 MARK4Q96L34 752 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 SIGLEC10Q96LC7 697 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 PIGQQ9BRB3 760 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 OPN3Q9H1Y3 402 aaPredicted RBP12.63□□□□□ -0.39
SMURF1-203ENST00000472627 SERHLQ9NQF3 203 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 LPAR3Q9UBY5 353 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 ZNF490Q9ULM2 529 aaPredicted RBP12.63□□□□□ -0.39
SMURF1-203ENST00000472627 EXO1Q9UQ84 846 aaKnown RBP12.63□□□□□ -0.39
SMURF1-203ENST00000472627 LAMP3Q9UQV4 416 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 CFL2Q9Y281 166 aa12.63□□□□□ -0.39
SMURF1-203ENST00000472627 RAI1Q7Z5J4 1906 aaPredicted RBP12.62□□□□□ -0.39
SMURF1-203ENST00000472627 ANK3Q12955 4377 aaKnown RBP12.62□□□□□ -0.39
SMURF1-203ENST00000472627 NCF1BA6NI72 391 aaPredicted RBP12.62□□□□□ -0.39
SMURF1-203ENST00000472627 NCF1CA8MVU1 366 aaPredicted RBP12.62□□□□□ -0.39
SMURF1-203ENST00000472627 HCRTR2O43614 444 aa12.62□□□□□ -0.39
SMURF1-203ENST00000472627 SLC35E2BP0CK96 405 aa12.62□□□□□ -0.39
SMURF1-203ENST00000472627 SLC35E2P0CK97 266 aa12.62□□□□□ -0.39
SMURF1-203ENST00000472627 CD8BP10966 210 aa12.62□□□□□ -0.39
SMURF1-203ENST00000472627 PCNAP12004 261 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms