RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 BTNL2Q9UIR0 455 aa13.37□□□□□ -0.27
ATG3-202ENST00000402314 ASF1AQ9Y294 204 aa13.37□□□□□ -0.27
ATG3-202ENST00000402314 SERTM1A2A2V5 107 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 LATO43561 262 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 LILRB5O75023 590 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 CISD3P0C7P0 127 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 SLC2A2P11168 524 aaPredicted RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 ALAS2P22557 587 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 ERP29P30040 261 aaKnown RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 CHI3L1P36222 383 aaPredicted RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 ETV6P41212 452 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 MLLT3P42568 568 aaPredicted RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 ASMTP46597 345 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 ALDH9A1P49189 494 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 INPP1P49441 399 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 CSNK2BP67870 215 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 FNDC3BQ53EP0 1204 aaKnown RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 SPIN4Q56A73 249 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 TYW3Q6IPR3 259 aaKnown RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 TNFAIP8L2Q6P589 184 aaPredicted RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 USP30Q70CQ3 517 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 Q8N402 240 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 TCEANCQ8N8B7 351 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 OR4M2Q8NGB6 313 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 DACT3Q96B18 629 aaPredicted RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 UPRTQ96BW1 309 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 ZBED6CLQ96FA7 236 aaPredicted RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 OTUB1Q96FW1 271 aaPredicted RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 EPYCQ99645 322 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 BRF2Q9HAW0 419 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 PLCXD1Q9NUJ7 323 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 SLC23A2Q9UGH3 650 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 POLHQ9Y253 713 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 DYRK1BQ9Y463 629 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 SPIN1Q9Y657 262 aaPredicted RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 PLXND1Q9Y4D7 1925 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 GSAPA4D1B5 854 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 ISM1B1AKI9 464 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 GTPBP1O00178 669 aaKnown RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 HPGDSO60760 199 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 FURINP09958 794 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 C1GALT1C1LP0DN25 315 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 PTGS2P35354 604 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 LIMK1P53667 647 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 PRMT2P55345 433 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 ST8SIA6P61647 398 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 SELENOWP63302 87 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 MICAQ29983 383 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 KRT73Q86Y46 540 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 DNAJC5GQ8N7S2 189 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 GON7Q9BXV9 100 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 SLC6A16Q9GZN6 736 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 FKBP14Q9NWM8 211 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 SSR3Q9UNL2 185 aa13.36□□□□□ -0.27
ATG3-202ENST00000402314 MRPS23Q9Y3D9 190 aaKnown RBP13.36□□□□□ -0.27
ATG3-202ENST00000402314 F5P12259 2224 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 FEZF1A0PJY2 475 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 ZNF197O14709 1029 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 PPM1DO15297 605 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 ADH5P11766 374 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 MRPL28Q13084 256 aaKnown RBP13.35□□□□□ -0.27
ATG3-202ENST00000402314 PGBD3Q8N328 593 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 SLC37A3Q8NCC5 494 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 OR9A1PQ8NGU1 263 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.35□□□□□ -0.27
ATG3-202ENST00000402314 SETD6Q8TBK2 473 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 SLC5A11Q8WWX8 675 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 RAB8BQ92930 207 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 REPS1Q96D71 796 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 NUS1Q96E22 293 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 CRELD1Q96HD1 420 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 COQ10AQ96MF6 247 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 RSPO3Q9BXY4 272 aaPredicted RBP13.35□□□□□ -0.27
ATG3-202ENST00000402314 RACGAP1Q9H0H5 632 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 BEX1Q9HBH7 125 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 CUEDC1Q9NWM3 386 aaPredicted RBP13.35□□□□□ -0.27
ATG3-202ENST00000402314 ZNF224Q9NZL3 707 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 TMCC3Q9ULS5 477 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 MAFFQ9ULX9 164 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 HCN4Q9Y3Q4 1203 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 TRAV6A0A075B6T7 132 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 TEX46H3BTG2 121 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 NUPL2O15504 423 aaKnown RBP13.35□□□□□ -0.27
ATG3-202ENST00000402314 TSPAN9O75954 239 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 GADD45GO95257 159 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 MYOGP15173 224 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 WASP42768 502 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 AVPR1BP47901 424 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 CTBP2P56545 445 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 TCEA2Q15560 299 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 ZNF658BQ4V348 819 aaPredicted RBP13.35□□□□□ -0.27
ATG3-202ENST00000402314 TOR1AIP1Q5JTV8 583 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 ATAT1Q5SQI0 421 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 ANXA8L1Q5VT79 327 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 KIAA0907Q7Z7F0 614 aaPredicted RBP13.35□□□□□ -0.27
ATG3-202ENST00000402314 CDH24Q86UP0 819 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 GATAD2BQ8WXI9 593 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 F2RL3Q96RI0 385 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 TVP23BQ9NYZ1 205 aa13.35□□□□□ -0.27
ATG3-202ENST00000402314 ZNF222Q9UK12 451 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms