RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ADM5C9JUS6 153 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SSNA1O43805 119 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ARL6IP5O75915 188 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 TCRBP04435 133 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 OR4Q2P0C623 313 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 LIMS3P0CW19 117 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 LIMS4P0CW20 117 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PAICSP22234 425 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ELAVL4P26378 380 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SLC1A3P43003 542 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 EEF1A2Q05639 463 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 FAM83HQ6ZRV2 1179 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 MRGPREQ86SM8 312 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ADGRG2Q8IZP9 1017 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 POGLUT1Q8NBL1 392 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 UXS1Q8NBZ7 420 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 FBXO15Q8NCQ5 510 aaPredicted RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 NPLOC4Q8TAT6 608 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 OR4K3Q96R72 315 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PAAF1Q9BRP4 392 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 WRAP53Q9BUR4 548 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 LHX3Q9UBR4 397 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 SF3B6Q9Y3B4 125 aaKnown RBP4.54□□□□□ -1.68
PTPN13-201ENST00000316707 PRSS21Q9Y6M0 314 aa4.54□□□□□ -1.68
PTPN13-201ENST00000316707 ARID2Q68CP9 1835 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 hCG_1807616A0A1W2PRN6 198 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PRR23D1E9PI22 279 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 GAPDHSO14556 408 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TSPAN4O14817 238 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PRR23D2P0DMB1 279 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CELP19835 753 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ZP3P21754 424 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SOAT1P35610 550 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 POLR2LP62875 67 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 POU6F2P78424 691 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 NAE1Q13564 534 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 EXOSC2Q13868 293 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ENTPD8Q5MY95 495 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 FAM69AQ5T7M9 428 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SDHAF4Q5VUM1 108 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 B3GNTL1Q67FW5 361 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ADNP2Q6IQ32 1131 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 GLRX5Q86SX6 157 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PIAS4Q8N2W9 510 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 HUS1BQ8NHY5 278 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF582Q96NG8 517 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM175Q9BSA9 504 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 DPCDQ9BVM2 203 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PRR14Q9BWN1 585 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 HMX1Q9NP08 348 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 A4GALTQ9NPC4 353 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ABRACLQ9P1F3 81 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TRIM77I1YAP6 450 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SYT5O00445 386 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 C6orf47O95873 294 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SOD1P00441 154 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 NPR2P20594 1047 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RFX3P48380 749 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 AFF1P51825 1210 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RAP2BP61225 183 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RPS25P62851 125 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 HBA1P69905 142 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CDH18Q13634 790 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SYTL3Q4VX76 610 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RAET1GQ6H3X3 334 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 FAM71E1Q6IPT2 247 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 C1orf94Q6P1W5 598 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 LINGO4Q6UY18 593 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 DEF8Q6ZN54 512 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CFAP52Q8N1V2 620 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SLC44A3Q8N4M1 653 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 FAM71CQ8NEG0 241 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 NXPE2Q96DL1 559 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 WDR34Q96EX3 536 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TRMT61AQ96FX7 289 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CCDC120Q96HB5 630 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ADAM2Q99965 735 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 OSGEPL1Q9H4B0 414 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TRIM36Q9NQ86 728 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 GABRQQ9UN88 632 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 MAP4K5Q9Y4K4 846 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 COL4A5P29400 1685 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 LRRN3E7EW58 273 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 WWP2O00308 870 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TOR1AO14656 332 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 B3GALT4O96024 378 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SERPIND1P05546 499 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 IGFBP6P24592 240 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CCR7P32248 378 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SEMG2Q02383 582 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 MGAT3Q09327 533 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TAF12Q16514 161 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SPDYE7PQ495Y7 208 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PRAMEF8Q5VWM4 474 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PRAMEF7Q5VXH5 474 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 FAM198BQ6UWH4 519 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RASSF6Q6ZTQ3 369 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SYT14Q8NB59 555 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TP53I13Q8NBR0 393 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RAET1EQ8TD07 263 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms