RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 FETUBQ9UGM5 382 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ZDHHC2Q9UIJ5 367 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 BOLA2-SMG1P6H3BVE0 249 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TSPAN6O43657 245 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 PRKYO43930 277 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TBX10O75333 385 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 SC5DO75845 299 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 NFATC4Q14934 902 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 RABL3Q5HYI8 236 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 CES4AQ5XG92 561 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 KLBQ86Z14 1044 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 DCUN1D4Q92564 292 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 SGTBQ96EQ0 304 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 METTL2AQ96IZ6 378 aaKnown RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 CNN2Q99439 309 aaKnown RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 PAK1IP1Q9NWT1 392 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TAS2R8Q9NYW2 309 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 PCDHB10Q9UN67 800 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 YIPF1Q9Y548 306 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 RIPK3Q9Y572 518 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 A0A087WUU8 490 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 PHYHO14832 338 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 IL1AP01583 271 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 GCGRP47871 477 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 CRYZQ08257 329 aaKnown RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 EXOC3L2Q2M3D2 409 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 RAB41Q5JT25 222 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 REM2Q8IYK8 340 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 NLGN4YQ8NFZ3 816 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 CLEC4CQ8WTT0 213 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 FRS2Q8WU20 508 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TFAP2BQ92481 460 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 CCDC32Q9BV29 185 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 OSBPL7Q9BZF2 842 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF223Q9UK11 482 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 MAFBQ9Y5Q3 323 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 FAM230AA0A1W2PPH8 454 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 K7EPK0 472 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 P04436 131 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 SLC2A5P22732 501 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 MEF2AQ02078 507 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 MOGSQ13724 837 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 IL17AQ16552 155 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ECM1Q16610 540 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 FAM71E2Q8N5Q1 922 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 C3orf58Q8NDZ4 430 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 KCTD13Q8WZ19 329 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TAAR8Q969N4 342 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TLCD1Q96CP7 247 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 C2orf42Q9NWW7 574 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ATG4BQ9Y4P1 393 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 GXYLT2A0PJZ3 443 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TSTD3H0UI37 97 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 GPR37L1O60883 481 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 CHRNB2P17787 502 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 CHATP28329 748 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 HTR2BP41595 481 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 RAB28P51157 221 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 NCS1P62166 190 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 NKX3-2P78367 333 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 EMX2Q04743 252 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 FPGSQ05932 587 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ARHGAP19Q14CB8 494 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 FAM69BQ5VUD6 431 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 TPRG1Q6ZUI0 275 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 S100A7AQ86SG5 101 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 ZFP82Q8N141 532 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 NUP43Q8NFH3 380 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 DBF4BQ8NFT6 615 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 OR8K5Q8NH50 307 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 SLC35F5Q8WV83 523 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 SORCS1Q8WY21 1168 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 OR4K3Q96R72 315 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 VRK1Q99986 396 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-201ENST00000302528 KCNJ16Q9NPI9 418 aa9.94□□□□□ -0.82
CLIP1-201ENST00000302528 SLC22A31A6NKX4 558 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 CD300LBA8K4G0 201 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 H7BY64 318 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF780AO75290 641 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 PPP5CP53041 499 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ARL6IP1Q15041 203 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 OR51T1Q8NGJ9 327 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 SLC41A3Q96GZ6 507 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 PRAP1Q96NZ9 151 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 FOLH1BQ9HBA9 442 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 PRMT8Q9NR22 394 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 DNAJB11Q9UBS4 358 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ADH1BP00325 375 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 MAOAP21397 527 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ELK4P28324 431 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 GCH1P30793 250 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 MAP2K4P45985 399 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 VEGFCP49767 419 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 CYCSP99999 105 aaKnown RBP9.93□□□□□ -0.82
CLIP1-201ENST00000302528 SLC18B1Q6NT16 456 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ARHGAP11AQ6P4F7 1023 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ASRGL1Q7L266 308 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ASPGQ86U10 573 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 PDSS2Q86YH6 399 aa9.93□□□□□ -0.82
CLIP1-201ENST00000302528 ZNF439Q8NDP4 499 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms