RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 Q8N402 240 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 KRTCAP2Q8N6L1 136 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 IL17RDQ8NFM7 739 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 GTPBP3Q969Y2 492 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF764Q96H86 408 aaPredicted RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 CAPNS2Q96L46 248 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ZSWIM3Q96MP5 696 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 OR4K3Q96R72 315 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 BBS4Q96RK4 519 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 BARD1Q99728 777 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 SLC6A15Q9H2J7 730 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 FN3KQ9H479 309 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 MYNNQ9NPC7 610 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TRIM36Q9NQ86 728 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ASB6Q9NWX5 421 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 MED11Q9P086 117 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TRPC4Q9UBN4 977 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM5Q9Y2B1 443 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 HSPB11Q9Y547 144 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 K7ERQ8 282 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TSC22D2O75157 780 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 PSIP1O75475 530 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 SEMA3DO95025 777 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 B3GALT4O96024 378 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 MSL3P1P0C860 447 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ARAFP10398 606 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TYRP14679 529 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF10P21506 573 aaPredicted RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 PSMD4P55036 377 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 CD83Q01151 205 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TAGLNQ01995 201 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 DUSP4Q13115 394 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 GPR50Q13585 617 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 CHRNA6Q15825 494 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 NDUFAF6Q330K2 333 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 PLK5Q496M5 336 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 WDR45BQ5MNZ6 344 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 HENMT1Q5T8I9 393 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 CRTC1Q6UUV9 634 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 RD3Q7Z3Z2 195 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 SLC7A5P1Q8MH63 180 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 CFAP52Q8N1V2 620 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 B3GNT7Q8NFL0 401 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 BTN2A2Q8WVV5 523 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 DNASE1L2Q92874 299 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ESAMQ96AP7 390 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 SCRN2Q96FV2 425 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 SLC35G5Q96KT7 338 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 DHRS9Q9BPW9 319 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 POLDIP3Q9BY77 421 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 POLMQ9NP87 494 aaPredicted RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 FZD3Q9NPG1 666 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 SPG21Q9NZD8 308 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 BAIAP2Q9UQB8 552 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 DLGAP4Q9Y2H0 992 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 PCDHGA2Q9Y5H1 932 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 DOCK8Q8NF50 2099 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 RANBP2P49792 3224 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 DUXAA6NLW8 204 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 FOXE1O00358 373 aaPredicted RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 CASC3O15234 703 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TP53P04637 393 aaPredicted RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 IL3P08700 152 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ALPPL2P10696 532 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ENDOUP21128 410 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 AZGP1P25311 298 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 GABRA5P31644 462 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 LIPAP38571 399 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TRA2BP62995 288 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ACTC1P68032 377 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ACTA1P68133 377 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ST3GAL3Q11203 375 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 POU4F2Q12837 409 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TARDBPQ13148 414 aaKnown RBP eCLIP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 NAE1Q13564 534 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 TRAM2Q15035 370 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 SF3B4Q15427 424 aaKnown RBP eCLIP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.94□□□□□ -1.787e-6■□□□□ 11.2
UBE4A-201ENST00000252108 VN1R5Q7Z5H4 357 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 VRK3Q8IV63 474 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 LIX1LQ8IVB5 337 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 DCBLD1Q8N8Z6 715 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 OR2AP1Q8NGE2 309 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 NFKBIDQ8NI38 313 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 HCAR2Q8TDS4 363 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 COQ8BQ96D53 544 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ZC3HAV1LQ96H79 300 aaKnown RBP3.94□□□□□ -1.78
UBE4A-201ENST00000252108 LRIG1Q96JA1 1093 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 CDADC1Q9BWV3 514 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 RAB11FIP5Q9BXF6 653 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ALOXE3Q9BYJ1 711 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 OR51E2Q9H255 320 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ANKRD19PQ9H560 264 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 LTB4R2Q9NPC1 389 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 GPR83Q9NYM4 423 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 UPB1Q9UBR1 384 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 ABCG2Q9UNQ0 655 aa3.94□□□□□ -1.78
UBE4A-201ENST00000252108 A0A1W2PQ09 198 aa3.93□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM129A0AVI4 362 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms