RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 SDHCQ99643 169 aaPredicted RBP7.84□□□□□ -1.16
CDC27-201ENST00000066544 PLA2G12AQ9BZM1 189 aa7.84□□□□□ -1.16
CDC27-201ENST00000066544 SP140LQ9H930 580 aa7.84□□□□□ -1.16
CDC27-201ENST00000066544 LHX9Q9NQ69 397 aa7.84□□□□□ -1.16
CDC27-201ENST00000066544 USP34Q70CQ2 3546 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 TSPAN11A1L157 253 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 SLC35F4A4IF30 521 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 HMGN2P05204 90 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 SRPRAP08240 638 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 CD79BP40259 229 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 AVPR1BP47901 424 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 KCNJ5P48544 419 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 FAM131AQ6UXB0 335 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ERN2Q76MJ5 926 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 PDZD3Q86UT5 571 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 TRIM48Q8IWZ4 208 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 NRSN1Q8IZ57 195 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 SMG7Q92540 1137 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 MTERF3Q96E29 417 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 E9PQ18 207 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 TSPAN19P0C672 248 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ITGB7P26010 798 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 PPP2R1BP30154 601 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 MRPS15P82914 257 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 PRKCDQ05655 676 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 C1DQ13901 141 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 ELAVL3Q14576 367 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 ZNF362Q5T0B9 420 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 FAM46CQ5VWP2 391 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 SAXO2Q658L1 398 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 TMEM107Q6UX40 140 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 UNC5DQ6UXZ4 953 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 RRM2BQ7LG56 351 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 LRRTM4Q86VH4 590 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 LINC01555Q8NAE3 123 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 KAT2AQ92830 837 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 LRIG1Q96JA1 1093 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 FCRL4Q96PJ5 515 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 PRRG3Q9BZD7 231 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 TP63Q9H3D4 680 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 MBNL1Q9NR56 388 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 ENOPH1Q9UHY7 261 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 SSR3Q9UNL2 185 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 KIAA0355O15063 1070 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 TMCC2O75069 709 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ATP6V1E1P36543 226 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ETV5P41161 510 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 P2RY2P41231 377 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 IL12RB1P42701 662 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ETV1P50549 477 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 CRTC2Q53ET0 693 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 C18orf63Q68DL7 685 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 TMEM145Q8NBT3 493 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 C7orf57Q8NEG2 295 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 OR8J1Q8NGP2 316 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 WDR34Q96EX3 536 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 DIRAS2Q96HU8 199 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 CCDC59Q9P031 241 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 NFKBIL1Q9UBC1 381 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 SLC13A4Q9UKG4 626 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 A0A1W2PQ09 198 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 SLC9A3R1O14745 358 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 ADH1CP00326 375 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 MYOGP15173 224 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 CSTF2P33240 577 aaKnown RBP eCLIP7.83□□□□□ -1.161e-6■□□□□ 10.9
CDC27-201ENST00000066544 SDC2P34741 201 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 GIPRP48546 466 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 DUSP2Q05923 314 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ILKQ13418 452 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 WSCD2Q2TBF2 565 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ZNF658BQ4V348 819 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 SLX4IPQ5VYV7 408 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 LCTLQ6UWM7 567 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ZNF793Q6ZN11 406 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ZNF557Q8N988 423 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 RGMAQ96B86 450 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ZNF354BQ96LW1 612 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 NEK6Q9HC98 313 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 ANKHQ9HCJ1 492 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 FZD3Q9NPG1 666 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 CNOT2Q9NZN8 540 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 COMMD3Q9UBI1 195 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 MGAT4BQ9UQ53 548 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 WBP11Q9Y2W2 641 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 RPL36Q9Y3U8 105 aaKnown RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 DENND4CQ5VZ89 1909 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 SH3D21A4FU49 640 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 PTTG1O95997 202 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 GNRH1P01148 92 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 RB1P06400 928 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 CHRM4P08173 479 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 GJA8P48165 433 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 PXNP49023 591 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 CLDN2P57739 230 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 CCDC85BQ15834 202 aaPredicted RBP7.83□□□□□ -1.16
CDC27-201ENST00000066544 RD3Q7Z3Z2 195 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 UBE3DQ7Z6J8 389 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 CCDC190Q86UF4 302 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 KRT73Q86Y46 540 aa7.83□□□□□ -1.16
CDC27-201ENST00000066544 SCAIQ8N9R8 606 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms