RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 FPGTO14772 594 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 TLX2O43763 284 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 EXTL3O43909 919 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 KIF5CO60282 957 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CTSVO60911 334 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 LRP3O75074 770 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 TSC22D2O75157 780 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 PRAMEF12O95522 483 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 NR3C1P04150 777 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 ATP1B1P05026 303 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 KRT8P05787 483 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CTAGE8P0CG41 777 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 THRBP10828 461 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CD59P13987 128 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 GNSP15586 552 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 TNNI3P19429 210 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 MSH3P20585 1137 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CYP3A5P20815 502 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 EFNA1P20827 205 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 HNRNPA2B1P22626 353 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 CA6P23280 308 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 GJB2P29033 226 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 RBMS1P29558 406 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 EPS15P42566 896 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 TNFRSF4P43489 277 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 HOXA1P49639 335 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 DNA2P51530 1060 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CCL11P51671 97 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CLCN4P51793 760 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 DVL1P1P54792 670 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 B3GALT5-AS1P59052 145 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 HERV-K104P63124 156 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 MYL7Q01449 175 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 HSF2Q03933 536 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 GAGE5Q13069 117 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 GAGE6Q13070 117 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 RIPK1Q13546 671 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 SNX1Q13596 522 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 ITGA9Q13797 1035 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CEACAM7Q14002 265 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 BTG3Q14201 252 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 SQLEQ14534 574 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 PDIA5Q14554 519 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 HERC3Q15034 1050 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 SLC1A5Q15758 541 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 ZKSCAN8Q15776 578 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 RABL6Q3YEC7 729 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 USH1GQ495M9 461 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 GPAT3Q53EU6 434 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 FGD3Q5JSP0 725 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 ATAD3BQ5T9A4 648 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 SNRNP48Q6IEG0 339 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 SULT1C3Q6IMI6 304 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 UNQ6126/PRO20091Q6UXV3 157 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 C17orf107Q6ZR85 190 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 C15orf52Q6ZUT6 534 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 FOXL2NBQ6ZUU3 175 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 SLC24A5Q71RS6 500 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 BNIPLQ7Z465 357 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 COX8CQ7Z4L0 72 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CTAGE4Q8IX94 777 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CENPLQ8N0S6 344 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 CERS5Q8N5B7 392 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 GBP7Q8N8V2 638 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 MAB21L3Q8N8X9 362 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 OR10T2Q8NGX3 314 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 SECTM1Q8WVN6 248 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 SLC47A1Q96FL8 570 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 RPGRIP1Q96KN7 1286 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CXorf58Q96LI9 332 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 GPR137Q96N19 417 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 ZNF583Q96ND8 569 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CDCA3Q99618 268 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 LRRC1Q9BTT6 524 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 FICDQ9BVA6 458 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 FUNDC2Q9BWH2 189 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 TRIM6Q9C030 488 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 OR2B2Q9GZK3 357 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 FAM49AQ9H0Q0 323 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 GANQ9H2C0 597 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 TFB2MQ9H5Q4 396 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 VPS37BQ9H9H4 285 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 EBF2Q9HAK2 575 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 UPF2Q9HAU5 1272 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 LRRC4Q9HBW1 653 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 VPS54Q9P1Q0 977 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 MRTO4Q9UKD2 239 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 MAN1B1Q9UKM7 699 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 SMC3Q9UQE7 1217 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CHMP2BQ9UQN3 213 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 TCF19Q9Y242 345 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 MRPS2Q9Y399 296 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 MFHAS1Q9Y4C4 1052 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CGNL1Q0VF96 1302 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 RNF123Q5XPI4 1314 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 GREB1LQ9C091 1923 aaPredicted RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 PIK3C2AO00443 1686 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 C4BP0C0L5 1744 aa2.85□□□□□ -1.95
VPS8-228ENST00000628962 CPSF1Q10570 1443 aaKnown RBP2.85□□□□□ -1.95
VPS8-228ENST00000628962 NCAPD2Q15021 1401 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms