RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PRSS21Q9Y6M0 314 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 VWA8A3KMH1 1905 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 TRAV6A0A075B6T7 132 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 GPR171O14626 319 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 KCNK5O95279 499 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 GLAP06280 429 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 LPLP06858 475 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 LCN1P31025 176 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 EPHA4P54764 986 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 FGL1Q08830 312 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 PTGES3Q15185 160 aaKnown RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 RSPO2Q6UXX9 243 aaPredicted RBP14.88□□□□□ -0.03
SYNE3-203ENST00000554873 TEX47Q8TBZ9 253 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 TMEM203Q969S6 136 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 SFXN2Q96NB2 322 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 NUDT15Q9NV35 164 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 WWOXQ9NZC7 414 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 TMEM5Q9Y2B1 443 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 PCDHB9Q9Y5E1 797 aa14.88□□□□□ -0.03
SYNE3-203ENST00000554873 MTMR11A4FU01 709 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 APOC3P02656 99 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 ADRB1P08588 477 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 H2AFB1P0C5Y9 115 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 H2AFB2P0C5Z0 115 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 CTPS1P17812 591 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 RHCEP18577 417 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 BDKRB1P46663 353 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 RAB13P51153 203 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 TWF1Q12792 350 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
SYNE3-203ENST00000554873 SPIN4Q56A73 249 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 SERPINA9Q86WD7 417 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 LGI4Q8N135 537 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 MAPKAP1Q9BPZ7 522 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 FZD3Q9NPG1 666 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 GPRC5BQ9NZH0 403 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 DLGAP4Q9Y2H0 992 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.87□□□□□ -0.03
SYNE3-203ENST00000554873 TCRBV16S1A1N1A0A5B0 115 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 FAM74A7A6NL05 159 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 A8MVJ9 347 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 CLDN11O75508 207 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 SLC25A14O95258 325 aaPredicted RBP14.87□□□□□ -0.03
SYNE3-203ENST00000554873 SULT1A3P0DMM9 295 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 SULT1A4P0DMN0 295 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 SLC11A2P49281 568 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 ARF5P84085 180 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 DUSP4Q13115 394 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 ZNF177Q13360 481 aaPredicted RBP14.87□□□□□ -0.03
SYNE3-203ENST00000554873 FAM74A3Q4VXF1 159 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 RNF219Q5W0B1 726 aaPredicted RBP14.87□□□□□ -0.03
SYNE3-203ENST00000554873 SLC27A4Q6P1M0 643 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 NCEH1Q6PIU2 408 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 FAM151BQ6UXP7 276 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 C16orf59Q7L2K0 433 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 NTMT1Q9BV86 223 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 GPR62Q9BZJ7 368 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 RERGLQ9H628 205 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 DPP7Q9UHL4 492 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 FBXL2Q9UKC9 423 aa14.87□□□□□ -0.03
SYNE3-203ENST00000554873 RFXANKO14593 260 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 ENTPD6O75354 484 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 GJB5O95377 273 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 C1QCP02747 245 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 KLKB1P03952 638 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 FABP1P07148 127 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 ALPIP09923 528 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 CPEP16870 476 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 BTF3P20290 206 aaKnown RBP14.86□□□□□ -0.03
SYNE3-203ENST00000554873 MMP12P39900 470 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 CAV3P56539 151 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 CTBP2P56545 445 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 RNLSQ5VYX0 342 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 MBOAT1Q6ZNC8 495 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 EIF4E3Q8N5X7 224 aaKnown RBP14.86□□□□□ -0.03
SYNE3-203ENST00000554873 OR4C15Q8NGM1 316 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 FAM193BQ96PV7 902 aaPredicted RBP14.86□□□□□ -0.03
SYNE3-203ENST00000554873 ABCG5Q9H222 651 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 BIN3Q9NQY0 253 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 PLXNA4Q9HCM2 1894 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 TEX13CA0A0J9YWL9 993 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 GNB5O14775 395 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 EBLN1P0CF75 366 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 ZNF7P17097 686 aaPredicted RBP14.86□□□□□ -0.03
SYNE3-203ENST00000554873 ATP5C1P36542 298 aaKnown RBP14.86□□□□□ -0.03
SYNE3-203ENST00000554873 RGS4P49798 205 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 FAM198BQ6UWH4 519 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 WASH2PQ6VEQ5 465 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 CERS6Q6ZMG9 384 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 RNF165Q6ZSG1 346 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 NLRC3Q7RTR2 1065 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 PTOV1Q86YD1 416 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 OR2T35Q8NGX2 323 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 TM9SF4Q92544 642 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 NSMAFQ92636 917 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 ACPTQ9BZG2 426 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 RSPH9Q9H1X1 276 aaPredicted RBP14.86□□□□□ -0.03
SYNE3-203ENST00000554873 DCAF16Q9NXF7 216 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 REV1Q9UBZ9 1251 aa14.86□□□□□ -0.03
SYNE3-203ENST00000554873 TRPS1Q9UHF7 1281 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms