RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 FAM32AQ9Y421 112 aaKnown RBP10.14□□□□□ -0.79
USP4-214ENST00000491791 ATG4BQ9Y4P1 393 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 SNX5Q9Y5X3 404 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 FRYLO94915 3013 aa10.14□□□□□ -0.79
USP4-214ENST00000491791 OTOGLQ3ZCN5 2332 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 KIR2DS5A0A0G2JLQ3 304 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 A0A0G2JNG1 304 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 PRAMEF27A3QJZ7 478 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 TMEM247A6NEH6 219 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 URADA6NGE7 173 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 ZNF99A8MXY4 864 aaPredicted RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 ISM1B1AKI9 464 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 KIR2DS3K7RE56 304 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 SYT5O00445 386 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 AXIN1O15169 862 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 CASC3O15234 703 aaKnown RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 PPM1DO15297 605 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 EMC8O43402 210 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 MPZL2O60487 215 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 SEMA4FO95754 770 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 AIFM1O95831 613 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 ADAP00813 363 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 IGHV4-34P06331 123 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 FHP07954 510 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 CDK4P11802 303 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 CD72P21854 359 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 EEF1B2P24534 225 aaKnown RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 MPIP34949 423 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 ALDH9A1P49189 494 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 MAN2A2P49641 1150 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 DGKEP52429 567 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 PLA2G16P53816 162 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 CLDN2P57739 230 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 UBE2IP63279 158 aaKnown RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 IL5RAQ01344 420 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 EMX1Q04741 257 aaPredicted RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 HSPB3Q12988 150 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 KIR2DS5Q14953 304 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 NPTX1Q15818 432 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 DUSP7Q16829 419 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 EXOC3L2Q2M3D2 409 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 SPDYE7PQ495Y7 208 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 EXOSC6Q5RKV6 272 aaKnown RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 TCTN3Q6NUS6 607 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 CD300LDQ6UXZ3 194 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 GALNT5Q7Z7M9 940 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 ASPGQ86U10 573 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 KRT73Q86Y46 540 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 PLD3Q8IV08 490 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 LGI4Q8N135 537 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 ZNF687Q8N1G0 1237 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 SVOPQ8N4V2 548 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 OR4E2Q8NGC2 313 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 RPLP0P6Q8NHW5 317 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 FAR1Q8WVX9 515 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 APH1BQ8WW43 257 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 CNRIP1Q96F85 164 aaPredicted RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 SLC35G5Q96KT7 338 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 BBS4Q96RK4 519 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 NELL2Q99435 816 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 TREX2Q9BQ50 279 aaPredicted RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 DGCR6LQ9BY27 220 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 LHPPQ9H008 270 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 TMEM168Q9H0V1 697 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 SYNPO2LQ9H987 977 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 SLC24A3Q9HC58 644 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 MS4A12Q9NXJ0 267 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 CALML5Q9NZT1 146 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 KCMF1Q9P0J7 381 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 NCDNQ9UBB6 729 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 PHF11Q9UIL8 331 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 MOSPD1Q9UJG1 213 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 FBXO4Q9UKT5 387 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 PSME2Q9UL46 239 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 PNMA8BQ9ULN7 279 aaPredicted RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 CDC14AQ9UNH5 594 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 MGAT4BQ9UQ53 548 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 LIPT1Q9Y234 373 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 MRPS17Q9Y2R5 130 aaKnown RBP10.13□□□□□ -0.79
USP4-214ENST00000491791 TESMINQ9Y4I5 508 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 SNX8Q9Y5X2 465 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 DMXL1Q9Y485 3027 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 CEP250Q9BV73 2442 aa10.13□□□□□ -0.79
USP4-214ENST00000491791 A0A1W2PRQ8 180 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 SH3D21A4FU49 640 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 FAM170BA6NMN3 283 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 FAAHO00519 579 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 FFAR1O14842 300 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 ZW10O43264 779 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 PCDHGA12O60330 932 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 CCNB2O95067 398 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 GADD45GO95257 159 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 ATE1O95260 518 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 TNFP01375 233 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 OPN1SWP03999 348 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 BCHEP06276 602 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 MATN1P21941 496 aa10.12□□□□□ -0.79
USP4-214ENST00000491791 AK4P27144 223 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms