RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 SOSTQ9BQB4 213 aa3.51□□□□□ -1.85
PRKD3-206ENST00000464552 RAB11FIP5Q9BXF6 653 aa3.51□□□□□ -1.85
PRKD3-206ENST00000464552 MTHFD2LQ9H903 347 aaPredicted RBP3.51□□□□□ -1.85
PRKD3-206ENST00000464552 RPF1Q9H9Y2 349 aaKnown RBP3.51□□□□□ -1.85
PRKD3-206ENST00000464552 POLD4Q9HCU8 107 aa3.51□□□□□ -1.85
PRKD3-206ENST00000464552 B3GAT2Q9NPZ5 323 aa3.51□□□□□ -1.85
PRKD3-206ENST00000464552 GSN-AS1Q9NRJ2 163 aa3.51□□□□□ -1.85
PRKD3-206ENST00000464552 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.51□□□□□ -1.85
PRKD3-206ENST00000464552 CHD7Q9P2D1 2997 aa3.51□□□□□ -1.85
PRKD3-206ENST00000464552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.51□□□□□ -1.85
PRKD3-206ENST00000464552 UBQLN1Q9UMX0 589 aaKnown RBP3.51□□□□□ -1.85
PRKD3-206ENST00000464552 VCANP13611 3396 aa3.51□□□□□ -1.85
PRKD3-206ENST00000464552 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 NCOR1O75376 2440 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 MYO7AQ13402 2215 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 TRANK1O15050 2925 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 TRAV24A0A0B4J272 114 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 I3L4J1 428 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 CLDN4O14493 209 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 OGTO15294 1046 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 CCL16O15467 120 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 STX6O43752 255 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 SNX3O60493 162 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ATP1B1P05026 303 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 CXCL8P10145 99 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 SYT1P21579 422 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ELAVL4P26378 380 aaKnown RBP3.5□□□□□ -1.85
PRKD3-206ENST00000464552 RPL9P32969 192 aaKnown RBP3.5□□□□□ -1.85
PRKD3-206ENST00000464552 OR1D2P34982 312 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 BRCC3P46736 316 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 OR3A2P47893 321 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 SLC12A3P55017 1021 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 CSE1LP55060 971 aaKnown RBP3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ASIC1P78348 528 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 YWHAHQ04917 246 aaPredicted RBP3.5□□□□□ -1.85
PRKD3-206ENST00000464552 BECN1Q14457 450 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 TMEM132DQ14C87 1099 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 C9orf152Q5JTZ5 239 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 SPECC1Q5M775 1068 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ARMCX5Q6P1M9 558 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ZBTB49Q6ZSB9 765 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 C1orf186Q6ZWK4 172 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 FCRLAQ7L513 359 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 CENPVQ7Z7K6 275 aaPredicted RBP3.5□□□□□ -1.85
PRKD3-206ENST00000464552 IQCHQ86VS3 1027 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ZFAND4Q86XD8 727 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 CD302Q8IX05 232 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 CCDC65Q8IXS2 484 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 GPR65Q8IYL9 337 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 DAW1Q8N136 415 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 KLHDC1Q8N7A1 406 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 C4orf32Q8N8J7 132 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 PIK3R3Q92569 461 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ANKRD36BP1Q96IX9 119 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ACCSQ96QU6 501 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 NUDT16L1Q9BRJ7 211 aaKnown RBP3.5□□□□□ -1.85
PRKD3-206ENST00000464552 TUBGCP4Q9UGJ1 667 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 PRDM4Q9UKN5 801 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 ELF5Q9UKW6 265 aaPredicted RBP3.5□□□□□ -1.85
PRKD3-206ENST00000464552 SELENOKQ9Y6D0 94 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 PRUNE2Q8WUY3 3088 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 MYH11P35749 1972 aa3.5□□□□□ -1.85
PRKD3-206ENST00000464552 SMIM28A0A1B0GU29 152 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 TRBC2A0A5B9 178 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 SYNDIG1LA6NDD5 238 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 GOLGA6L4A6NEF3 574 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 TFECO14948 347 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-206ENST00000464552 YEATS4O95619 227 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 TNNC2P02585 160 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 THEGLP0DJG4 465 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 CD27P26842 260 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 NMT1P30419 496 aaKnown RBP3.49□□□□□ -1.85
PRKD3-206ENST00000464552 HOXA9P31269 272 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 TFAMQ00059 246 aaKnown RBP3.49□□□□□ -1.85
PRKD3-206ENST00000464552 TSPY1Q01534 308 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 ROR1Q01973 937 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 SPAG1Q07617 926 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 COX10Q12887 443 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 BFSP1Q12934 665 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 RALGDSQ12967 914 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 SRSF9Q13242 221 aaKnown RBP eCLIP3.49□□□□□ -1.85
PRKD3-206ENST00000464552 UPP1Q16831 310 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 ARMC4Q5T2S8 1044 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 FAM173BQ6P4H8 233 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 CHMP1BQ7LBR1 199 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 ZER1Q7Z7L7 766 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 ITIH5Q86UX2 942 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 THEM5Q8N1Q8 247 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 LEMD2Q8NC56 503 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 TMEM161BQ8NDZ6 487 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 C11orf45Q8TAV5 145 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 METTL21AQ8WXB1 218 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 ING5Q8WYH8 240 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 FAM218AQ96MZ4 157 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 TSPAN18Q96SJ8 248 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 LGMNQ99538 433 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 SLC2A11Q9BYW1 496 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 CCSER1Q9C0I3 900 aa3.49□□□□□ -1.85
PRKD3-206ENST00000464552 CUEDC2Q9H467 287 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms