RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
PRKD3-206ENST00000464552 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
PRKD3-206ENST00000464552 PHF23Q9BUL5 403 aaPredicted RBP21.89■■□□□ 1.09
PRKD3-206ENST00000464552 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.09
PRKD3-206ENST00000464552 FOXD1Q16676 465 aa20.24■□□□□ 0.83
PRKD3-206ENST00000464552 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
PRKD3-206ENST00000464552 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
PRKD3-206ENST00000464552 ADRA2BP18089 450 aa19.32■□□□□ 0.68
PRKD3-206ENST00000464552 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
PRKD3-206ENST00000464552 MSH5O43196 834 aa18.77■□□□□ 0.6
PRKD3-206ENST00000464552 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
PRKD3-206ENST00000464552 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
PRKD3-206ENST00000464552 MAPK8IP2Q13387 824 aaPredicted RBP17.56■□□□□ 0.4
PRKD3-206ENST00000464552 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
PRKD3-206ENST00000464552 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
PRKD3-206ENST00000464552 POTEDQ86YR6 584 aa17.3■□□□□ 0.36
PRKD3-206ENST00000464552 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
PRKD3-206ENST00000464552 KCNA4P22459 653 aa17.16■□□□□ 0.34
PRKD3-206ENST00000464552 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
PRKD3-206ENST00000464552 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
PRKD3-206ENST00000464552 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
PRKD3-206ENST00000464552 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
PRKD3-206ENST00000464552 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
PRKD3-206ENST00000464552 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
PRKD3-206ENST00000464552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
PRKD3-206ENST00000464552 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
PRKD3-206ENST00000464552 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
PRKD3-206ENST00000464552 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
PRKD3-206ENST00000464552 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
PRKD3-206ENST00000464552 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
PRKD3-206ENST00000464552 ZBTB22O15209 634 aa15.78■□□□□ 0.12
PRKD3-206ENST00000464552 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
PRKD3-206ENST00000464552 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
PRKD3-206ENST00000464552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
PRKD3-206ENST00000464552 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
PRKD3-206ENST00000464552 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
PRKD3-206ENST00000464552 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
PRKD3-206ENST00000464552 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
PRKD3-206ENST00000464552 APLP2Q06481 763 aa15.57■□□□□ 0.08
PRKD3-206ENST00000464552 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
PRKD3-206ENST00000464552 CAPN15O75808 1086 aa15.41■□□□□ 0.06
PRKD3-206ENST00000464552 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
PRKD3-206ENST00000464552 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
PRKD3-206ENST00000464552 TRHP20396 242 aaPredicted RBP15.3■□□□□ 0.04
PRKD3-206ENST00000464552 ATF5Q9Y2D1 282 aaPredicted RBP15.27■□□□□ 0.04
PRKD3-206ENST00000464552 DSG3P32926 999 aa15.22■□□□□ 0.03
PRKD3-206ENST00000464552 ABCB7O75027 752 aa15.08■□□□□ 0
PRKD3-206ENST00000464552 POLA2Q14181 598 aa15.04■□□□□ -0
PRKD3-206ENST00000464552 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
PRKD3-206ENST00000464552 FBLN2P98095 1184 aa14.69□□□□□ -0.06
PRKD3-206ENST00000464552 MKRN4PQ13434 485 aaPredicted RBP14.61□□□□□ -0.07
PRKD3-206ENST00000464552 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
PRKD3-206ENST00000464552 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
PRKD3-206ENST00000464552 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
PRKD3-206ENST00000464552 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
PRKD3-206ENST00000464552 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
PRKD3-206ENST00000464552 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
PRKD3-206ENST00000464552 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
PRKD3-206ENST00000464552 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
PRKD3-206ENST00000464552 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
PRKD3-206ENST00000464552 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
PRKD3-206ENST00000464552 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
PRKD3-206ENST00000464552 FKBP8Q14318 412 aa14.08□□□□□ -0.16
PRKD3-206ENST00000464552 PROM2Q8N271 834 aa14.02□□□□□ -0.17
PRKD3-206ENST00000464552 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
PRKD3-206ENST00000464552 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
PRKD3-206ENST00000464552 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
PRKD3-206ENST00000464552 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
PRKD3-206ENST00000464552 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
PRKD3-206ENST00000464552 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
PRKD3-206ENST00000464552 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRKD3-206ENST00000464552 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
PRKD3-206ENST00000464552 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
PRKD3-206ENST00000464552 POTEHQ6S545 545 aa13.68□□□□□ -0.22
PRKD3-206ENST00000464552 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
PRKD3-206ENST00000464552 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
PRKD3-206ENST00000464552 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
PRKD3-206ENST00000464552 MIER1Q8N108 512 aa13.5□□□□□ -0.25
PRKD3-206ENST00000464552 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
PRKD3-206ENST00000464552 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
PRKD3-206ENST00000464552 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
PRKD3-206ENST00000464552 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
PRKD3-206ENST00000464552 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
PRKD3-206ENST00000464552 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRKD3-206ENST00000464552 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
PRKD3-206ENST00000464552 HAX1O00165 279 aa13.33□□□□□ -0.28
PRKD3-206ENST00000464552 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
PRKD3-206ENST00000464552 IFNLR1Q8IU57 520 aaPredicted RBP13.27□□□□□ -0.29
PRKD3-206ENST00000464552 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
PRKD3-206ENST00000464552 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
PRKD3-206ENST00000464552 NUBP1P53384 320 aa13.19□□□□□ -0.3
PRKD3-206ENST00000464552 EVX2Q03828 476 aa13.19□□□□□ -0.3
PRKD3-206ENST00000464552 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
PRKD3-206ENST00000464552 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
PRKD3-206ENST00000464552 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
PRKD3-206ENST00000464552 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
PRKD3-206ENST00000464552 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
PRKD3-206ENST00000464552 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
PRKD3-206ENST00000464552 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
PRKD3-206ENST00000464552 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms