RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TCF20Q9UGU0 1960 aaKnown RBP17.83■□□□□ 0.45
CBX1-202ENST00000393408 A0A1W2PRQ8 180 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 M0R3H8 397 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 AP3D1O14617 1153 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 TLX2O43763 284 aaPredicted RBP17.83■□□□□ 0.44
CBX1-202ENST00000393408 VEGFDO43915 354 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 TMPRSS11DO60235 418 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 IL7P13232 177 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 ST8SIA6P61647 398 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 SYT14P1Q58G82 188 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 ARMC4Q5T2S8 1044 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 MMAAQ8IVH4 418 aaKnown RBP17.83■□□□□ 0.44
CBX1-202ENST00000393408 REM2Q8IYK8 340 aaPredicted RBP17.83■□□□□ 0.44
CBX1-202ENST00000393408 FAM181AQ8N9Y4 354 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 TP53INP1Q96A56 240 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 SLC25A46Q96AG3 418 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 ZBED6CLQ96FA7 236 aaPredicted RBP17.83■□□□□ 0.44
CBX1-202ENST00000393408 ZNF764Q96H86 408 aaPredicted RBP17.83■□□□□ 0.44
CBX1-202ENST00000393408 WASH6PQ9NQA3 447 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 TESQ9UGI8 421 aaKnown RBP17.83■□□□□ 0.44
CBX1-202ENST00000393408 N6AMT1Q9Y5N5 214 aa17.83■□□□□ 0.44
CBX1-202ENST00000393408 FAM47E-STBD1D6RA91 191 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 LZTS3O60299 673 aaPredicted RBP17.82■□□□□ 0.44
CBX1-202ENST00000393408 OR12D1P0DN82 309 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 AZGP1P25311 298 aaKnown RBP17.82■□□□□ 0.44
CBX1-202ENST00000393408 COX10Q12887 443 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 DHCR24Q15392 516 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 ZNF517Q6ZMY9 492 aaPredicted RBP17.82■□□□□ 0.44
CBX1-202ENST00000393408 ZER1Q7Z7L7 766 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 FGF11Q92914 225 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 QRFPRQ96P65 431 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 TPK1Q9H3S4 243 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 TXNL4BQ9NX01 149 aaKnown RBP17.82■□□□□ 0.44
CBX1-202ENST00000393408 TEX10Q9NXF1 929 aaPredicted RBP17.82■□□□□ 0.44
CBX1-202ENST00000393408 P2RX2Q9UBL9 471 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 PLD2O14939 933 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 CDRT1O95170 752 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 RAB36O95755 333 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 LINC00271P0C7V0 271 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 MMP11P24347 488 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 CXCR2P25025 360 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 ETV5P41161 510 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 ETV1P50549 477 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 REEP5Q00765 189 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 FLYWCH1Q4VC44 716 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 USP30Q70CQ3 517 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 C12orf40Q86WS4 652 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 TFGQ92734 400 aaPredicted RBP17.82■□□□□ 0.44
CBX1-202ENST00000393408 UCN3Q969E3 161 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 OR51I1Q9H343 314 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 MAN2C1Q9NTJ4 1040 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 ACSS1Q9NUB1 689 aaPredicted RBP17.82■□□□□ 0.44
CBX1-202ENST00000393408 TMEM98Q9Y2Y6 226 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 COL4A3Q01955 1670 aa17.82■□□□□ 0.44
CBX1-202ENST00000393408 FEZF1A0PJY2 475 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 LGI1O95970 557 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 IL1AP01583 271 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 CPEP16870 476 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 NTHL1P78549 312 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 MXD1Q05195 221 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 GINS1Q14691 196 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 NDUFA9Q16795 377 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 NUDT13Q86X67 352 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 RAB43Q86YS6 212 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 OR5D16Q8NGK9 328 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 SLC35G5Q96KT7 338 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 ZNF582Q96NG8 517 aaPredicted RBP17.81■□□□□ 0.44
CBX1-202ENST00000393408 OR2B2Q9GZK3 357 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 KLHL20Q9Y2M5 609 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 PTPRSQ13332 1948 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 A0A1W2PQ09 198 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 HIDE1A8MVS5 230 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 IDH3BO43837 385 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 MSL3P1P0C860 447 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 GIPRP48546 466 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 CCR8P51685 355 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 EFNB1P98172 346 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 ARHGAP19Q14CB8 494 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 MLC1Q15049 377 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 GLYR1Q49A26 553 aaPredicted RBP17.81■□□□□ 0.44
CBX1-202ENST00000393408 ACSM5Q6NUN0 579 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 OR4K5Q8NGD3 323 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 WFIKKN2Q8TEU8 576 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 MSLNLQ96KJ4 702 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 NELL2Q99435 816 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 FNDC11Q9BVV2 318 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 MIXL1Q9H2W2 232 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 TIGARQ9NQ88 270 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 TMEM39AQ9NV64 488 aa17.81■□□□□ 0.44
CBX1-202ENST00000393408 CKAP5Q14008 2032 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 NDUFS4O43181 175 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 ADRB3P13945 408 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 PSMB5P28074 263 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 ERVFC1P60507 584 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 BNC1Q01954 994 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 RPA4Q13156 261 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 TCEAL5Q5H9L2 206 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 KIAA1211LQ6NV74 962 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 UBE3DQ7Z6J8 389 aa17.8■□□□□ 0.44
CBX1-202ENST00000393408 CLDN22Q8N7P3 220 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms