RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CDRT1O95170 752 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 SIX3O95343 332 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 NR2C1P13056 603 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 LCP1P13796 627 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 PSMB4P28070 264 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 CCR1P32246 355 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 SUOXP51687 545 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 TSPAN5P62079 268 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 MEF2AQ02078 507 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 IFRD2Q12894 506 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 GANABQ14697 944 aaKnown RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 CCDC85BQ15834 202 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 TECRLQ5HYJ1 363 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 C1orf53Q5VUE5 145 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 AADACL4Q5VUY2 407 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 CNIH2Q6PI25 160 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 OR4N4Q8N0Y3 316 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF548Q8NEK5 533 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 BPIFCQ8NFQ6 507 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 OR2T12Q8NG77 320 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 TRMT10AQ8TBZ6 339 aaKnown RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 TWIST2Q8WVJ9 160 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 PCED1BQ96HM7 432 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 SMOQ99835 787 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 ADAT1Q9BUB4 502 aaKnown RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 RNF32Q9H0A6 362 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 CRISPLD1Q9H336 500 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 RAD18Q9NS91 495 aa7.12□□□□□ -1.27
CDKL5-201ENST00000379989 TRIP12Q14669 1992 aaPredicted RBP7.12□□□□□ -1.27
CDKL5-201ENST00000379989 TMEM200CA6NKL6 621 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 RHPN2P1A8MT19 583 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 WASH3PC4AMC7 463 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 NEDD8-MDP1E9PL57 170 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 GFRA2O00451 464 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 FPGTO14772 594 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 SOX30O94993 753 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 AP2A1O95782 977 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 LATS1O95835 1130 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 S1PR4O95977 384 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 SULT1A3P0DMM9 295 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 SULT1A4P0DMN0 295 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 SELPP16109 830 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 LMO2P25791 158 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 ITGB7P26010 798 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 SOX3P41225 446 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 HSPA7P48741 367 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 POLR2JP52435 117 aaKnown RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 ZP1P60852 638 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 SH3BP2P78314 561 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 COTL1Q14019 142 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 MRPL58Q14197 206 aaKnown RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF57Q68EA5 555 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 DHRS7BQ6IAN0 325 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 CXCL17Q6UXB2 119 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 DENND6AQ8IWF6 608 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 PDZD9Q8IXQ8 264 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 KDF1Q8NAX2 398 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 CHST14Q8NCH0 376 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 METTL6Q8TCB7 284 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 FAM162AQ96A26 154 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 OTUB1Q96FW1 271 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 HRASLS5Q96KN8 279 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 KATNB1Q9BVA0 655 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 ULBP1Q9BZM6 244 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 RIMS4Q9H426 269 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 PRDM12Q9H4Q4 367 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 WDCPQ9H6R7 721 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 HMX1Q9NP08 348 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 NMRK2Q9NPI5 230 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 C11orf16Q9NQ32 467 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 GKN1Q9NS71 199 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 NUDT15Q9NV35 164 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 MED11Q9P086 117 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 CRYL1Q9Y2S2 319 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 TMEM238LA0A1B0GVL6 79 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 SMIM30A4D0T7 59 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 METTL21EPA6NDL7 271 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 E9PI62 339 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 ARVCFO00192 962 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 PHYHO14832 338 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 IRAK2O43187 625 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 NBNO60934 754 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 MLYCDO95822 493 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 HPP00738 406 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 PRKAR2AP13861 404 aaKnown RBP7.11□□□□□ -1.27
CDKL5-201ENST00000379989 GABRB1P18505 474 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 MAGEA2P43356 314 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 EPHA4P54764 986 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 RAB4BP61018 213 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 GRIN2CQ14957 1233 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 CDO1Q16878 200 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 AKIRIN2Q53H80 203 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 HSDL2Q6YN16 418 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 TMEM91Q6ZNR0 172 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 ZNF605Q86T29 641 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 DOCK3Q8IZD9 2030 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 SLC22A18Q96BI1 424 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 FBXO17Q96EF6 278 aa7.11□□□□□ -1.27
CDKL5-201ENST00000379989 OR2M2Q96R28 347 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms