RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 RGMBQ6NW40 437 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 TMEM205Q6UW68 189 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 CLEC14AQ86T13 490 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 NECAB3Q96P71 396 aaPredicted RBP17.27■□□□□ 0.36
SMC4-201ENST00000344722 ATG5Q9H1Y0 275 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 OR2S2Q9NQN1 319 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 KLK4Q9Y5K2 254 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 LRRC37A3O60309 1634 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 NUP188Q5SRE5 1749 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 ALDOCP09972 364 aaKnown RBP17.27■□□□□ 0.36
SMC4-201ENST00000344722 TRAPPC2P0DI81 140 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 TRAPPC2BP0DI82 140 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 GABRB3P28472 473 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 RBMXP38159 391 aaKnown RBP17.27■□□□□ 0.36
SMC4-201ENST00000344722 FRKP42685 505 aaPredicted RBP17.27■□□□□ 0.36
SMC4-201ENST00000344722 TAP2Q03519 686 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 MLLT11Q13015 90 aaPredicted RBP17.27■□□□□ 0.36
SMC4-201ENST00000344722 HAPLN2Q9GZV7 340 aa17.27■□□□□ 0.36
SMC4-201ENST00000344722 NUPL2O15504 423 aaKnown RBP17.27■□□□□ 0.35
SMC4-201ENST00000344722 NDUFS4O43181 175 aa17.27■□□□□ 0.35
SMC4-201ENST00000344722 CD34P28906 385 aa17.27■□□□□ 0.35
SMC4-201ENST00000344722 IL12BP29460 328 aa17.27■□□□□ 0.35
SMC4-201ENST00000344722 SOX2P48431 317 aa17.27■□□□□ 0.35
SMC4-201ENST00000344722 WNT7BP56706 349 aa17.27■□□□□ 0.35
SMC4-201ENST00000344722 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.27■□□□□ 0.35
SMC4-201ENST00000344722 BEST4Q8NFU0 473 aa17.27■□□□□ 0.35
SMC4-201ENST00000344722 OR56A3Q8NH54 315 aa17.27■□□□□ 0.35
SMC4-201ENST00000344722 ARHGAP39Q9C0H5 1083 aa17.27■□□□□ 0.35
SMC4-201ENST00000344722 SRCP12931 536 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 TAZQ16635 292 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 ZNF791Q3KP31 576 aaPredicted RBP17.26■□□□□ 0.35
SMC4-201ENST00000344722 ABHD13Q7L211 337 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 TMPRSS12Q86WS5 348 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 ZNF527Q8NB42 609 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 ASF1BQ9NVP2 202 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 DEC1Q9P2X7 70 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 KLHL21Q9UJP4 597 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 IL4RP24394 825 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 LRRC32Q14392 662 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 ZNF789Q5FWF6 425 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 GALNT7Q86SF2 657 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMC4-201ENST00000344722 PDGFAP04085 211 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 C1GALT1C1LP0DN25 315 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 RAB41Q5JT25 222 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 TEX26Q8N6G2 289 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 FBXO22Q8NEZ5 403 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 ANKK1Q8NFD2 765 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 OR2L8Q8NGY9 312 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 MAL2Q969L2 176 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 LIPT1Q9Y234 373 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 C4AP0C0L4 1744 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 C4BP0C0L5 1744 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 LOC105369274A0A096LPK9 316 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 CAP1Q01518 475 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 FAPQ12884 760 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 SSX6Q7RTT6 188 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 OR4N4Q8N0Y3 316 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 OR4K5Q8NGD3 323 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 PBDC1Q9BVG4 233 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 SRMSQ9H3Y6 488 aa17.26■□□□□ 0.35
SMC4-201ENST00000344722 HPGDSO60760 199 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 IFNA17P01571 189 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 JAG1P78504 1218 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 SYT6Q5T7P8 510 aaPredicted RBP17.25■□□□□ 0.35
SMC4-201ENST00000344722 BTNL2Q9UIR0 455 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 NALCNQ8IZF0 1738 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 A0A0D9SEW6 157 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 LAMP1P11279 417 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 ETV1P50549 477 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 RAB40BQ12829 278 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 GAS6Q14393 721 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 ODF4Q2M2E3 257 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 DCAF4L2Q8NA75 395 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 OR7G2Q8NG99 324 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 THAP4Q8WY91 577 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 GRHPRQ9UBQ7 328 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3DA0A087WVF3 549 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3IA0A087WXS9 549 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3EA0A087X179 549 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3KA0A087X1G2 549 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3FA6NER0 549 aaPredicted RBP17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3LB9A6J9 549 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 PRAMEF2O60811 474 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3HP0C7X1 549 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 CD9P21926 228 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 CXCR1P25024 350 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 ACTBP60709 375 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 ARF3P61204 181 aaPredicted RBP17.25■□□□□ 0.35
SMC4-201ENST00000344722 ACTG1P63261 375 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 ARF1P84077 181 aaKnown RBP17.25■□□□□ 0.35
SMC4-201ENST00000344722 GFOD2Q3B7J2 385 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 GXYLT1Q4G148 440 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3GQ6DHY5 549 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3CQ6IPX1 549 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 C6orf120Q7Z4R8 191 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 TBC1D3Q8IZP1 549 aaPredicted RBP17.25■□□□□ 0.35
SMC4-201ENST00000344722 LSMEM2Q8N112 164 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 FN3KQ9H479 309 aa17.25■□□□□ 0.35
SMC4-201ENST00000344722 GKN1Q9NS71 199 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms