RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 QSOX1O00391 747 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 OR5F1O95221 314 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 NTN1O95631 604 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 SLC25A27O95847 323 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 MAP4K2Q12851 820 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 C21orf62-AS1Q17RA5 79 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 SWI5Q1ZZU3 235 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 NHLRC1Q6VVB1 395 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 RBMS3Q6XE24 437 aaKnown RBP13.7□□□□□ -0.22
CDT1-201ENST00000301019 OR2T4Q8NH00 348 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 ARRDC2Q8TBH0 407 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 WDR20Q8TBZ3 569 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 LPPQ93052 612 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 DOHHQ9BU89 302 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 DLL4Q9NR61 685 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
CDT1-201ENST00000301019 NDUFB11Q9NX14 153 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 LRFN2Q9ULH4 789 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 H3BRB1 525 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 PRKYO43930 277 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 HBP1O60381 514 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 EVX1P49640 407 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 MLLT1Q03111 559 aaPredicted RBP13.7□□□□□ -0.22
CDT1-201ENST00000301019 TWF1Q12792 350 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 KIAA1211LQ6NV74 962 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 C9orf43Q8TAL5 461 aaPredicted RBP13.7□□□□□ -0.22
CDT1-201ENST00000301019 CNOT9Q92600 299 aaKnown RBP13.7□□□□□ -0.22
CDT1-201ENST00000301019 MARVELD3Q96A59 401 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 RFT1Q96AA3 541 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 RNFT2Q96EX2 444 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 ERMAPQ96PL5 475 aaPredicted RBP13.7□□□□□ -0.22
CDT1-201ENST00000301019 REG4Q9BYZ8 158 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 FOLH1BQ9HBA9 442 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 PRKAG2Q9UGJ0 569 aa13.7□□□□□ -0.22
CDT1-201ENST00000301019 HCN1O60741 890 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 TCRBP04435 133 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 PTHLHP12272 177 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 EFEMP1Q12805 493 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 IER5LQ5T953 404 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 KIAA1161Q6NSJ0 714 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 CEACAM20Q6UY09 585 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 ING5Q8WYH8 240 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 MYEOVQ96EZ4 313 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 MSLNLQ96KJ4 702 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 ARL6Q9H0F7 186 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 NEU3Q9UQ49 428 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 LOC285095A0A1B0GVY8 99 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 ODC1P11926 461 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 ANXA8P13928 327 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 EPB42P16452 691 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 CXCL2P19875 107 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 OR1E1P30953 314 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 CENPAP49450 140 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 SCRN3Q0VDG4 424 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 ADAM15Q13444 863 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 C18orf63Q68DL7 685 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 SBSNQ6UWP8 590 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 Q6ZTK2 550 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 AP3S1Q92572 193 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 ABHD1Q96SE0 405 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 SLC6A15Q9H2J7 730 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 DNAJC11Q9NVH1 559 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 SRRDQ9UH36 339 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 UBQLN1Q9UMX0 589 aaKnown RBP13.69□□□□□ -0.22
CDT1-201ENST00000301019 LIPT1Q9Y234 373 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 TLR6Q9Y2C9 796 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 GCM2O75603 506 aaPredicted RBP13.69□□□□□ -0.22
CDT1-201ENST00000301019 PRAMEF12O95522 483 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 EIF4EP06730 217 aaKnown RBP13.69□□□□□ -0.22
CDT1-201ENST00000301019 PAN3Q58A45 887 aaKnown RBP13.69□□□□□ -0.22
CDT1-201ENST00000301019 SLC25A25Q6KCM7 469 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 LINGO4Q6UY18 593 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 RTL3Q8N8U3 475 aaKnown RBP13.69□□□□□ -0.22
CDT1-201ENST00000301019 OR4F15Q8NGB8 312 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 SMAP2Q8WU79 429 aaPredicted RBP13.69□□□□□ -0.22
CDT1-201ENST00000301019 IGSF8Q969P0 613 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 NXPE3Q969Y0 559 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 ATF6BQ99941 703 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 MROH8Q9H579 483 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 EVA1AQ9H8M9 152 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 PCOLCE2Q9UKZ9 415 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 GSTK1Q9Y2Q3 226 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 ANK1P16157 1881 aa13.69□□□□□ -0.22
CDT1-201ENST00000301019 SPTBP11277 2137 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 RANBP2P49792 3224 aaKnown RBP13.68□□□□□ -0.22
CDT1-201ENST00000301019 PIKFYVEQ9Y2I7 2098 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 MFSD2BA6NFX1 497 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 DNASE2O00115 360 aaPredicted RBP13.68□□□□□ -0.22
CDT1-201ENST00000301019 GPR31O00270 319 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 PEX11BO96011 259 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 IGF2P01344 180 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 IL1AP01583 271 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 TFP02787 698 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 NMBP08949 121 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 FOSL1P15407 271 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 HNF1BP35680 557 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 MAPKAPK2P49137 400 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 SERPINA13PQ6UXR4 307 aa13.68□□□□□ -0.22
CDT1-201ENST00000301019 TFAP2EQ6VUC0 442 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms