RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 ATE1P16639 503 aa5.33□□□□□ -1.56
snR56snR56 ERG4P25340 473 aa5.33□□□□□ -1.56
snR56snR56 FUN30P31380 1131 aa5.33□□□□□ -1.56
snR56snR56 MOT2P34909 587 aaKnown RBP5.33□□□□□ -1.56
snR56snR56 ATG19P35193 415 aa5.33□□□□□ -1.56
snR56snR56 EEB1Q02891 456 aa5.33□□□□□ -1.56
snR56snR56 OMS1Q06668 471 aa5.33□□□□□ -1.56
snR56snR56 IRC10Q08118 586 aa5.33□□□□□ -1.56
snR56snR56 RKM4Q12504 494 aa5.33□□□□□ -1.56
snR56snR56 POL32P47110 350 aa5.32□□□□□ -1.56
snR56snR56 YGL176CP46945 554 aa5.31□□□□□ -1.56
snR56snR56 LGE1Q02796 332 aaKnown RBP5.31□□□□□ -1.56
snR56snR56 ACF2Q12168 779 aa5.31□□□□□ -1.56
snR56snR56 TRP4P07285 380 aaPredicted RBP5.3□□□□□ -1.56
snR56snR56 CUE2P36075 443 aaKnown RBP5.3□□□□□ -1.56
snR56snR56 SNM1P40993 198 aa5.3□□□□□ -1.56
snR56snR56 TYW3P53177 273 aa5.3□□□□□ -1.56
snR56snR56 UPC2Q12151 913 aa5.3□□□□□ -1.56
snR56snR56 CAD1P24813 409 aaKnown RBP5.29□□□□□ -1.56
snR56snR56 YKL107WP34251 309 aa5.29□□□□□ -1.56
snR56snR56 SLD2P34252 453 aa5.29□□□□□ -1.56
snR56snR56 NPP2P39997 493 aa5.29□□□□□ -1.56
snR56snR56 YMR206WQ03695 313 aa5.29□□□□□ -1.56
snR56snR56 RRP15Q06511 250 aaPredicted RBP5.28□□□□□ -1.56
snR56snR56 MTH1P35198 433 aa5.27□□□□□ -1.57
snR56snR56 MUK1Q02866 612 aa5.27□□□□□ -1.57
snR56snR56 TRM13Q12383 476 aa5.27□□□□□ -1.57
snR56snR56 STE14P32584 239 aa5.26□□□□□ -1.57
snR56snR56 SFB2P53953 876 aa5.26□□□□□ -1.57
snR56snR56 TIM44Q01852 431 aa5.26□□□□□ -1.57
snR56snR56 RNT1Q02555 471 aa5.26□□□□□ -1.57
snR56snR56 SLU7Q02775 382 aaKnown RBP5.26□□□□□ -1.57
snR56snR56 CDC34P14682 295 aa5.25□□□□□ -1.57
snR56snR56 SAH1P39954 449 aaKnown RBP5.25□□□□□ -1.57
snR56snR56 ERG5P54781 538 aa5.25□□□□□ -1.57
snR56snR56 RMD1Q03441 430 aa5.25□□□□□ -1.57
snR56snR56 PPR1P07272 904 aaPredicted RBP5.24□□□□□ -1.57
snR56snR56 ALG7P07286 448 aa5.24□□□□□ -1.57
snR56snR56 GND2P53319 492 aa5.24□□□□□ -1.57
snR56snR56 YLR225CQ05948 407 aaKnown RBP5.24□□□□□ -1.57
snR56snR56 RPC82P32349 654 aa5.23□□□□□ -1.57
snR56snR56 MET10P39692 1035 aa5.23□□□□□ -1.57
snR56snR56 SPC42P36094 363 aa5.22□□□□□ -1.57
snR56snR56 SED4P25365 1065 aa5.21□□□□□ -1.58
snR56snR56 CDC12P32468 407 aaKnown RBP5.21□□□□□ -1.58
snR56snR56 NDJ1Q12366 352 aa5.21□□□□□ -1.58
snR56snR56 SPO20Q04359 397 aa5.2□□□□□ -1.58
snR56snR56 PIN4P34217 668 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
snR56snR56 GYP7P48365 746 aa5.19□□□□□ -1.58
snR56snR56 ESC2Q06340 456 aa5.19□□□□□ -1.58
snR56snR56 SNF7P39929 240 aaKnown RBP5.18□□□□□ -1.58
snR56snR56 SDS3P40505 327 aa5.18□□□□□ -1.58
snR56snR56 RAI1P53063 387 aaKnown RBP5.18□□□□□ -1.58
snR56snR56 SRP1Q02821 542 aaKnown RBP5.18□□□□□ -1.58
snR56snR56 MSL5Q12186 476 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
snR56snR56 PET112P33893 541 aa5.17□□□□□ -1.58
snR56snR56 YER158CP40095 573 aa5.16□□□□□ -1.58
snR56snR56 SEC21P32074 935 aaKnown RBP5.15□□□□□ -1.59
snR56snR56 YGR053CP53234 283 aa5.15□□□□□ -1.59
snR56snR56 YKR078WP36158 585 aaKnown RBP5.14□□□□□ -1.59
snR56snR56 PPS1P38148 807 aa5.14□□□□□ -1.59
snR56snR56 TSL1P38427 1098 aaKnown RBP5.14□□□□□ -1.59
snR56snR56 PEX19Q07418 342 aa5.14□□□□□ -1.59
snR56snR56 HBT1Q07653 1046 aaKnown RBP5.14□□□□□ -1.59
snR56snR56 FRE5Q08908 694 aa5.14□□□□□ -1.59
snR56snR56 SUT2Q12286 268 aa5.14□□□□□ -1.59
snR56snR56 FBP1P09201 348 aa5.13□□□□□ -1.59
snR56snR56 CTF13P35203 478 aa5.13□□□□□ -1.59
snR56snR56 SSL1Q04673 461 aaPredicted RBP5.13□□□□□ -1.59
snR56snR56 YPR196WQ06595 470 aa5.13□□□□□ -1.59
snR56snR56 MRH1Q12117 320 aaPredicted RBP5.13□□□□□ -1.59
snR56snR56 NOT3P06102 836 aaKnown RBP5.12□□□□□ -1.59
snR56snR56 ABD1P32783 436 aaPredicted RBP5.12□□□□□ -1.59
snR56snR56 MNR2P35724 969 aa5.12□□□□□ -1.59
snR56snR56 YHL017WP38745 532 aa5.12□□□□□ -1.59
snR56snR56 MBP1P39678 833 aa5.12□□□□□ -1.59
snR56snR56 YKE2P52553 114 aa5.12□□□□□ -1.59
snR56snR56 PEX2P32800 271 aa5.11□□□□□ -1.59
snR56snR56 YBR238CP38330 731 aaKnown RBP5.11□□□□□ -1.59
snR56snR56 DUS3Q06053 668 aaKnown RBP5.11□□□□□ -1.59
snR56snR56 STE13P33894 931 aa5.1□□□□□ -1.59
snR56snR56 SDP1P40479 209 aa5.1□□□□□ -1.59
snR56snR56 OYE2Q03558 400 aaKnown RBP5.1□□□□□ -1.59
snR56snR56 TUB3P09734 445 aaKnown RBP5.09□□□□□ -1.59
snR56snR56 CDC48P25694 835 aaKnown RBP5.09□□□□□ -1.59
snR56snR56 ELO3P40319 345 aa5.09□□□□□ -1.59
snR56snR56 GUS1P46655 708 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
snR56snR56 DAS1P47005 663 aa5.09□□□□□ -1.59
snR56snR56 TRM11Q12463 433 aa5.09□□□□□ -1.59
snR56snR56 BNR1P40450 1375 aa5.08□□□□□ -1.6
snR56snR56 MET3P08536 511 aa5.08□□□□□ -1.6
snR56snR56 NPP1P25353 742 aa5.08□□□□□ -1.6
snR56snR56 FAA4P47912 694 aaKnown RBP5.08□□□□□ -1.6
snR56snR56 DLT1Q04216 342 aa5.08□□□□□ -1.6
snR56snR56 ADY4Q05955 493 aa5.08□□□□□ -1.6
snR56snR56 SBA1P28707 216 aaKnown RBP5.07□□□□□ -1.6
snR56snR56 HEM3P28789 327 aa5.07□□□□□ -1.6
snR56snR56 AGP1P25376 633 aa5.06□□□□□ -1.6
snR56snR56 CTF8P38877 133 aa5.06□□□□□ -1.6
snR56snR56 RPD3P32561 433 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms