RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	BYE1	P36106	594 aa		4.09	□□□□□ -1.76
APL4	YPR029C	MCM7	P38132	845 aa		4.09	□□□□□ -1.76
APL4	YPR029C	SMC2	P38989	1170 aa	Known RBP	4.09	□□□□□ -1.76
APL4	YPR029C	DSS1	P39112	969 aa		4.09	□□□□□ -1.76
APL4	YPR029C	SWD1	P39706	426 aa		4.09	□□□□□ -1.76
APL4	YPR029C	MGS1	P40151	587 aa		4.09	□□□□□ -1.76
APL4	YPR029C	CCT7	P42943	550 aa	Known RBP	4.09	□□□□□ -1.76
APL4	YPR029C	DSL1	P53847	754 aa		4.09	□□□□□ -1.76
APL4	YPR029C	FDC1	Q03034	503 aa		4.09	□□□□□ -1.76
APL4	YPR029C	DAL4	Q04895	635 aa		4.09	□□□□□ -1.76
APL4	YPR029C	MDM36	Q06820	579 aa		4.09	□□□□□ -1.76
APL4	YPR029C	CUE5	Q08412	411 aa	Known RBP	4.09	□□□□□ -1.76
APL4	YPR029C	GRE2	Q12068	342 aa	Known RBP	4.09	□□□□□ -1.76
APL4	YPR029C	KDX1	P36005	433 aa		4.08	□□□□□ -1.76
APL4	YPR029C	SIT1	P39980	628 aa		4.08	□□□□□ -1.76
APL4	YPR029C	KHA1	P40309	873 aa		4.08	□□□□□ -1.76
APL4	YPR029C	UTP18	P40362	594 aa	Predicted RBP	4.08	□□□□□ -1.76
APL4	YPR029C	PXA1	P41909	870 aa		4.08	□□□□□ -1.76
APL4	YPR029C	ZIM17	P42844	174 aa		4.08	□□□□□ -1.76
APL4	YPR029C	NIT2	P47016	307 aa		4.08	□□□□□ -1.76
APL4	YPR029C	VPS53	P47061	822 aa		4.08	□□□□□ -1.76
APL4	YPR029C	CCM1	P48237	864 aa	Predicted RBP	4.08	□□□□□ -1.76
APL4	YPR029C	MAL11	P53048	616 aa		4.08	□□□□□ -1.76
APL4	YPR029C	PUS6	P53294	404 aa		4.08	□□□□□ -1.76
APL4	YPR029C	ADA2	Q02336	434 aa		4.08	□□□□□ -1.76
APL4	YPR029C	ARA2	Q04212	335 aa		4.08	□□□□□ -1.76
APL4	YPR029C	ADE13	Q05911	482 aa	Known RBP	4.08	□□□□□ -1.76
APL4	YPR029C	BLS1	Q06071	122 aa		4.08	□□□□□ -1.76
APL4	YPR029C	YCG1	Q06680	1035 aa		4.08	□□□□□ -1.76
APL4	YPR029C	MDM12	Q92328	271 aa		4.08	□□□□□ -1.76
APL4	YPR029C	OM45	P16547	393 aa		4.07	□□□□□ -1.76
APL4	YPR029C	RPB10	P22139	70 aa		4.07	□□□□□ -1.76
APL4	YPR029C	PRP28	P23394	588 aa		4.07	□□□□□ -1.76
APL4	YPR029C	GUT2	P32191	649 aa		4.07	□□□□□ -1.76
APL4	YPR029C	PAH1	P32567	862 aa		4.07	□□□□□ -1.76
APL4	YPR029C	COY1	P34237	679 aa		4.07	□□□□□ -1.76
APL4	YPR029C	BET3	P36149	193 aa		4.07	□□□□□ -1.76
APL4	YPR029C	RFC1	P38630	861 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	KAP123	P40069	1113 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	RIC1	P40395	1056 aa		4.07	□□□□□ -1.76
APL4	YPR029C	FOL2	P51601	243 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	ZIP2	P53061	704 aa		4.07	□□□□□ -1.76
APL4	YPR029C	EFM5	P53200	248 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	GIM3	P53900	129 aa		4.07	□□□□□ -1.76
APL4	YPR029C	HOT1	Q03213	719 aa		4.07	□□□□□ -1.76
APL4	YPR029C	HAS1	Q03532	505 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	RRB1	Q04225	511 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	MCP2	Q06567	569 aa		4.07	□□□□□ -1.76
APL4	YPR029C	PHM7	Q12252	991 aa		4.07	□□□□□ -1.76
APL4	YPR029C	APC2	Q12440	853 aa		4.07	□□□□□ -1.76
APL4	YPR029C	AI4	P03878	556 aa		4.07	□□□□□ -1.76
APL4	YPR029C	GAP1	P19145	602 aa	Predicted RBP	4.07	□□□□□ -1.76
APL4	YPR029C	PRP9	P19736	530 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	SBA1	P28707	216 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	FBP26	P32604	452 aa		4.07	□□□□□ -1.76
APL4	YPR029C	ISC10	P32645	267 aa		4.07	□□□□□ -1.76
APL4	YPR029C	ERR3	P42222	437 aa		4.07	□□□□□ -1.76
APL4	YPR029C	POL31	P46957	487 aa		4.07	□□□□□ -1.76
APL4	YPR029C	PFD1	P46988	109 aa		4.07	□□□□□ -1.76
APL4	YPR029C	MDE1	P47095	244 aa		4.07	□□□□□ -1.76
APL4	YPR029C	ERV25	P54837	211 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	PEX25	Q02969	394 aa		4.07	□□□□□ -1.76
APL4	YPR029C	DPB4	Q04603	196 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	PMT7	Q06644	662 aa		4.07	□□□□□ -1.76
APL4	YPR029C	CSR1	Q06705	408 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	ETT1	Q08421	412 aa	Known RBP	4.07	□□□□□ -1.76
APL4	YPR029C	MSS18	P08593	268 aa		4.06	□□□□□ -1.76
APL4	YPR029C	ILS1	P09436	1072 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	AAC3	P18238	307 aa		4.06	□□□□□ -1.76
APL4	YPR029C	NAM7	P30771	971 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	SPC110	P32380	944 aa		4.06	□□□□□ -1.76
APL4	YPR029C	PPQ1	P32945	549 aa		4.06	□□□□□ -1.76
APL4	YPR029C	YLF2	P38746	405 aa		4.06	□□□□□ -1.76
APL4	YPR029C	EMP65	P40085	556 aa		4.06	□□□□□ -1.76
APL4	YPR029C	SEC28	P40509	296 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	MKT1	P40850	830 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	SEC26	P41810	973 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	EMW1	P42842	904 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	MAD3	P47074	515 aa		4.06	□□□□□ -1.76
APL4	YPR029C	UPF3	P48412	387 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	YAP1802	P53309	568 aa		4.06	□□□□□ -1.76
APL4	YPR029C	CIK1	Q01649	594 aa		4.06	□□□□□ -1.76
APL4	YPR029C	MPC54	Q08550	464 aa		4.06	□□□□□ -1.76
APL4	YPR029C	ISA2	Q12425	185 aa		4.06	□□□□□ -1.76
APL4	YPR029C	KSS1	P14681	368 aa		4.06	□□□□□ -1.76
APL4	YPR029C	MNE1	P24720	663 aa		4.06	□□□□□ -1.76
APL4	YPR029C	LCB1	P25045	558 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	SPB1	P25582	841 aa	Predicted RBP	4.06	□□□□□ -1.76
APL4	YPR029C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
APL4	YPR029C	MDJ1	P35191	511 aa		4.06	□□□□□ -1.76
APL4	YPR029C	MUD2	P36084	527 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	UIP5	P36137	443 aa		4.06	□□□□□ -1.76
APL4	YPR029C	RDH54	P38086	958 aa		4.06	□□□□□ -1.76
APL4	YPR029C	YBR197C	P38306	217 aa		4.06	□□□□□ -1.76
APL4	YPR029C	RIM11	P38615	370 aa		4.06	□□□□□ -1.76
APL4	YPR029C	GDI1	P39958	451 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	TPA1	P40032	644 aa	Known RBP	4.06	□□□□□ -1.76
APL4	YPR029C	QRI7	P43122	407 aa		4.06	□□□□□ -1.76
APL4	YPR029C	ALR2	P43553	858 aa		4.06	□□□□□ -1.76
APL4	YPR029C	EPL1	P43572	832 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms