RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W HFI1Q12060 488 aa11.87□□□□□ -0.51
PRE6YOL038W LAA1P39526 2014 aa11.86□□□□□ -0.51
PRE6YOL038W POL3P15436 1097 aa11.86□□□□□ -0.51
PRE6YOL038W GLN3P18494 730 aa11.86□□□□□ -0.51
PRE6YOL038W NPA3P47122 385 aa11.86□□□□□ -0.51
PRE6YOL038W RTT102P53330 157 aa11.86□□□□□ -0.51
PRE6YOL038W YNL134CP53912 376 aaKnown RBP11.86□□□□□ -0.51
PRE6YOL038W MMR1Q06324 491 aa11.86□□□□□ -0.51
PRE6YOL038W YOR022CQ12204 715 aa11.86□□□□□ -0.51
PRE6YOL038W RLF2Q12495 606 aa11.86□□□□□ -0.51
PRE6YOL038W ZPS1Q12512 249 aa11.86□□□□□ -0.51
PRE6YOL038W TOM70P07213 617 aaKnown RBP11.85□□□□□ -0.51
PRE6YOL038W FRS2P15625 503 aaKnown RBP11.85□□□□□ -0.51
PRE6YOL038W CSE2P33308 149 aa11.85□□□□□ -0.51
PRE6YOL038W GCS1P35197 352 aa11.85□□□□□ -0.51
PRE6YOL038W ESL1P40456 1118 aa11.85□□□□□ -0.51
PRE6YOL038W ENV11P53246 860 aa11.85□□□□□ -0.51
PRE6YOL038W YDL057WQ07379 328 aa11.85□□□□□ -0.51
PRE6YOL038W NBL1Q3E7Y6 73 aa11.85□□□□□ -0.51
PRE6YOL038W ATG19P35193 415 aa11.84□□□□□ -0.51
PRE6YOL038W RDH54P38086 958 aa11.84□□□□□ -0.51
PRE6YOL038W BUD16P39988 312 aa11.84□□□□□ -0.51
PRE6YOL038W LAM5P43560 674 aa11.84□□□□□ -0.51
PRE6YOL038W UBA2P52488 636 aa11.84□□□□□ -0.51
PRE6YOL038W GUP1P53154 560 aa11.84□□□□□ -0.51
PRE6YOL038W CAF130P53280 1122 aaPredicted RBP11.84□□□□□ -0.51
PRE6YOL038W PFK1P16861 987 aaKnown RBP11.83□□□□□ -0.52
PRE6YOL038W ISY1P21374 235 aaPredicted RBP11.83□□□□□ -0.52
PRE6YOL038W RPT1P33299 467 aaKnown RBP11.83□□□□□ -0.52
PRE6YOL038W MAL33P38157 468 aa11.83□□□□□ -0.52
PRE6YOL038W OYE3P41816 400 aaPredicted RBP11.83□□□□□ -0.52
PRE6YOL038W YGL081WP53156 320 aa11.83□□□□□ -0.52
PRE6YOL038W PIL1P53252 339 aaKnown RBP11.83□□□□□ -0.52
PRE6YOL038W YNR014WP53719 212 aa11.83□□□□□ -0.52
PRE6YOL038W YDR090CQ03193 310 aa11.83□□□□□ -0.52
PRE6YOL038W DBP5P20449 482 aaKnown RBP11.82□□□□□ -0.52
PRE6YOL038W RAM2P29703 316 aa11.82□□□□□ -0.52
PRE6YOL038W DPH2P32461 534 aa11.82□□□□□ -0.52
PRE6YOL038W COT1P32798 439 aa11.82□□□□□ -0.52
PRE6YOL038W PEX2P32800 271 aa11.82□□□□□ -0.52
PRE6YOL038W VID24P38263 362 aa11.82□□□□□ -0.52
PRE6YOL038W THI6P41835 540 aa11.82□□□□□ -0.52
PRE6YOL038W TAM41P53230 385 aa11.82□□□□□ -0.52
PRE6YOL038W CKA2P19454 339 aa11.81□□□□□ -0.52
PRE6YOL038W MBR1P23493 339 aa11.81□□□□□ -0.52
PRE6YOL038W APM2P38700 605 aa11.81□□□□□ -0.52
PRE6YOL038W NUP82P40368 713 aa11.81□□□□□ -0.52
PRE6YOL038W YIR016WP40572 265 aa11.81□□□□□ -0.52
PRE6YOL038W SPO71Q03868 1245 aa11.81□□□□□ -0.52
PRE6YOL038W LCD1Q04377 747 aa11.81□□□□□ -0.52
PRE6YOL038W SYN8P31377 255 aa11.8□□□□□ -0.52
PRE6YOL038W YEL1P34225 687 aa11.8□□□□□ -0.52
PRE6YOL038W DAK2P43550 591 aa11.8□□□□□ -0.52
PRE6YOL038W VID30P53076 958 aa11.8□□□□□ -0.52
PRE6YOL038W SCP160P06105 1222 aaKnown RBP RIP-Chip data11.79□□□□□ -0.52not detected
PRE6YOL038W RPL4AP10664 362 aaKnown RBP11.79□□□□□ -0.52
PRE6YOL038W PGI1P12709 554 aaKnown RBP11.79□□□□□ -0.52
PRE6YOL038W RSA4P25382 515 aaKnown RBP11.79□□□□□ -0.52
PRE6YOL038W RDS1P25611 832 aa11.79□□□□□ -0.52
PRE6YOL038W NAM7P30771 971 aaKnown RBP11.79□□□□□ -0.52
PRE6YOL038W SEC21P32074 935 aaKnown RBP11.79□□□□□ -0.52
PRE6YOL038W PRX1P34227 261 aaKnown RBP11.79□□□□□ -0.52
PRE6YOL038W MRPL7P36519 292 aa11.79□□□□□ -0.52
PRE6YOL038W MRX3P38172 270 aa11.79□□□□□ -0.52
PRE6YOL038W YHR202WP38887 602 aa11.79□□□□□ -0.52
PRE6YOL038W CCC2P38995 1004 aa11.79□□□□□ -0.52
PRE6YOL038W XDJ1P39102 459 aa11.79□□□□□ -0.52
PRE6YOL038W RPL4BP49626 362 aaKnown RBP11.79□□□□□ -0.52
PRE6YOL038W ALT2P52892 507 aa11.79□□□□□ -0.52
PRE6YOL038W CUL3P53202 744 aa11.79□□□□□ -0.52
PRE6YOL038W TOF1P53840 1238 aa11.79□□□□□ -0.52
PRE6YOL038W MAP1Q01662 387 aaKnown RBP RIP-Chip data11.79□□□□□ -0.52not detected
PRE6YOL038W MCM3P24279 971 aaKnown RBP11.78□□□□□ -0.52
PRE6YOL038W BUD2P33314 1104 aa11.78□□□□□ -0.52
PRE6YOL038W TTI1P36097 1038 aa11.78□□□□□ -0.52
PRE6YOL038W YER186CP40101 306 aa11.78□□□□□ -0.52
PRE6YOL038W MAF1P41910 395 aa11.78□□□□□ -0.52
PRE6YOL038W RTC4P53850 401 aa11.78□□□□□ -0.52
PRE6YOL038W TRS130Q03660 1102 aa11.78□□□□□ -0.52
PRE6YOL038W ECM7Q06200 448 aa11.78□□□□□ -0.52
PRE6YOL038W SGO1Q08490 590 aa11.78□□□□□ -0.52
PRE6YOL038W PKH2Q12236 1081 aaKnown RBP11.78□□□□□ -0.52
PRE6YOL038W HIS4P00815 799 aaKnown RBP11.77□□□□□ -0.53
PRE6YOL038W RGP1P16664 663 aa11.77□□□□□ -0.53
PRE6YOL038W PEX1P24004 1043 aa11.77□□□□□ -0.53
PRE6YOL038W YSC83P32792 385 aa11.77□□□□□ -0.53
PRE6YOL038W MNN4P36044 1178 aa11.77□□□□□ -0.53
PRE6YOL038W CCL1P37366 393 aa11.77□□□□□ -0.53
PRE6YOL038W ORC5P50874 479 aa11.77□□□□□ -0.53
PRE6YOL038W FOB1O13329 566 aa11.76□□□□□ -0.53
PRE6YOL038W HXK1P04806 485 aaKnown RBP11.76□□□□□ -0.53
PRE6YOL038W KEX2P13134 814 aa11.76□□□□□ -0.53
PRE6YOL038W BIO2P32451 375 aa11.76□□□□□ -0.53
PRE6YOL038W HEL1P36113 551 aa11.76□□□□□ -0.53
PRE6YOL038W ULI1P43604 169 aa11.76□□□□□ -0.53
PRE6YOL038W VTC3Q02725 835 aa11.76□□□□□ -0.53
PRE6YOL038W COG8Q04632 607 aa11.76□□□□□ -0.53
PRE6YOL038W OSW2Q12202 724 aa11.76□□□□□ -0.53
PRE6YOL038W TFC8Q12308 588 aa11.76□□□□□ -0.53
PRE6YOL038W CIT2P08679 460 aa11.75□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms