RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	ARK1	P53974	638 aa		13.96	□□□□□ -0.17
LSM3	YLR438C-A	EBS1	Q03466	884 aa	Known RBP	13.96	□□□□□ -0.17
LSM3	YLR438C-A	COQ9	Q05779	260 aa		13.96	□□□□□ -0.17
LSM3	YLR438C-A	CUR1	Q06469	252 aa		13.96	□□□□□ -0.17
LSM3	YLR438C-A	MDM20	Q12387	796 aa	Known RBP	13.96	□□□□□ -0.17
LSM3	YLR438C-A	DAL7	P21826	554 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	KIN82	P25341	720 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	MRC1	P25588	1096 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	EFT1	P32324	842 aa	Known RBP	13.95	□□□□□ -0.18
LSM3	YLR438C-A	SMY2	P32909	740 aa	Known RBP	13.95	□□□□□ -0.18
LSM3	YLR438C-A	LDH1	P38139	375 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	TOS3	P43637	560 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	PRY3	P47033	881 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	ACF4	P47129	309 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	WAR1	Q03631	944 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	YDL057W	Q07379	328 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	MED1	Q12321	566 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	HIF1	Q12373	385 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	ATG11	Q12527	1178 aa		13.95	□□□□□ -0.18
LSM3	YLR438C-A	PHO8	P11491	566 aa		13.94	□□□□□ -0.18
LSM3	YLR438C-A	YSC83	P32792	385 aa		13.94	□□□□□ -0.18
LSM3	YLR438C-A	SAP190	P36123	1033 aa		13.94	□□□□□ -0.18
LSM3	YLR438C-A	GUA1	P38625	525 aa	Known RBP	13.94	□□□□□ -0.18
LSM3	YLR438C-A	BIM1	P40013	344 aa		13.94	□□□□□ -0.18
LSM3	YLR438C-A	HUL4	P40985	892 aa		13.94	□□□□□ -0.18
LSM3	YLR438C-A	NBP1	P52919	319 aa	Predicted RBP	13.94	□□□□□ -0.18
LSM3	YLR438C-A	TFC8	Q12308	588 aa		13.94	□□□□□ -0.18
LSM3	YLR438C-A	SPT8	P38915	602 aa		13.93	□□□□□ -0.18
LSM3	YLR438C-A	AVT1	P47082	602 aa		13.93	□□□□□ -0.18
LSM3	YLR438C-A	RTT102	P53330	157 aa		13.93	□□□□□ -0.18
LSM3	YLR438C-A	YOL075C	Q08234	1294 aa		13.93	□□□□□ -0.18
LSM3	YLR438C-A	HFI1	Q12060	488 aa		13.93	□□□□□ -0.18
LSM3	YLR438C-A	MAK16	P10962	306 aa	Predicted RBP	13.92	□□□□□ -0.18
LSM3	YLR438C-A	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	13.92	□□□□□ -0.18	not detected
LSM3	YLR438C-A	NAM7	P30771	971 aa	Known RBP	13.92	□□□□□ -0.18
LSM3	YLR438C-A	PSY4	P38193	441 aa		13.92	□□□□□ -0.18
LSM3	YLR438C-A	ERC1	P38767	581 aa		13.92	□□□□□ -0.18
LSM3	YLR438C-A	AFG3	P39925	761 aa		13.92	□□□□□ -0.18
LSM3	YLR438C-A	CAF130	P53280	1122 aa	Predicted RBP	13.92	□□□□□ -0.18
LSM3	YLR438C-A	TCO89	Q08921	799 aa		13.92	□□□□□ -0.18
LSM3	YLR438C-A	MSH3	P25336	1018 aa		13.91	□□□□□ -0.18
LSM3	YLR438C-A	YET1	P35723	206 aa		13.91	□□□□□ -0.18
LSM3	YLR438C-A	UIP5	P36137	443 aa		13.91	□□□□□ -0.18
LSM3	YLR438C-A	LEO1	P38439	464 aa		13.91	□□□□□ -0.18
LSM3	YLR438C-A	AIP1	P46680	615 aa	Known RBP	13.91	□□□□□ -0.18
LSM3	YLR438C-A	FYV8	P46949	817 aa	Known RBP	13.91	□□□□□ -0.18
LSM3	YLR438C-A	JJJ3	P47138	172 aa		13.91	□□□□□ -0.18
LSM3	YLR438C-A	COG4	Q06096	861 aa		13.91	□□□□□ -0.18
LSM3	YLR438C-A	SWI6	P09959	803 aa		13.9	□□□□□ -0.18
LSM3	YLR438C-A	TRK2	P28584	889 aa		13.9	□□□□□ -0.18
LSM3	YLR438C-A	GIR2	Q03768	265 aa	Predicted RBP	13.9	□□□□□ -0.18
LSM3	YLR438C-A	YAP7	Q08182	245 aa		13.9	□□□□□ -0.18
LSM3	YLR438C-A	IES4	Q08561	116 aa		13.9	□□□□□ -0.18
LSM3	YLR438C-A	TMA16	Q08687	178 aa		13.9	□□□□□ -0.18
LSM3	YLR438C-A	DUR3	P33413	735 aa		13.89	□□□□□ -0.19
LSM3	YLR438C-A	CTM1	P38818	585 aa		13.89	□□□□□ -0.19
LSM3	YLR438C-A	VPS72	Q03388	795 aa		13.89	□□□□□ -0.19
LSM3	YLR438C-A	ECM29	P38737	1868 aa		13.89	□□□□□ -0.19
LSM3	YLR438C-A	MSS51	P32335	436 aa		13.88	□□□□□ -0.19
LSM3	YLR438C-A	KTR2	P33550	425 aa		13.88	□□□□□ -0.19
LSM3	YLR438C-A	YEL1	P34225	687 aa		13.88	□□□□□ -0.19
LSM3	YLR438C-A	EBP2	P36049	427 aa	Known RBP	13.88	□□□□□ -0.19
LSM3	YLR438C-A	ALD5	P40047	520 aa	Known RBP	13.88	□□□□□ -0.19
LSM3	YLR438C-A	TAM41	P53230	385 aa		13.88	□□□□□ -0.19
LSM3	YLR438C-A	TPO2	P53283	614 aa		13.88	□□□□□ -0.19
LSM3	YLR438C-A	YDR090C	Q03193	310 aa		13.88	□□□□□ -0.19
LSM3	YLR438C-A	SPO75	Q07798	868 aa		13.88	□□□□□ -0.19
LSM3	YLR438C-A	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.87	□□□□□ -0.19	not detected
LSM3	YLR438C-A	SHE10	P53075	577 aa		13.87	□□□□□ -0.19
LSM3	YLR438C-A	YNL146W	P53906	100 aa		13.87	□□□□□ -0.19
LSM3	YLR438C-A	VTC3	Q02725	835 aa		13.87	□□□□□ -0.19
LSM3	YLR438C-A	MLH2	Q07980	695 aa		13.87	□□□□□ -0.19
LSM3	YLR438C-A	HEM1	P09950	548 aa	Predicted RBP	13.86	□□□□□ -0.19
LSM3	YLR438C-A	CHS2	P14180	963 aa		13.86	□□□□□ -0.19
LSM3	YLR438C-A	DPH2	P32461	534 aa		13.86	□□□□□ -0.19
LSM3	YLR438C-A	MNN4	P36044	1178 aa		13.86	□□□□□ -0.19
LSM3	YLR438C-A	AVT3	P36062	692 aa		13.86	□□□□□ -0.19
LSM3	YLR438C-A	PAM1	P37304	830 aa	Known RBP	13.86	□□□□□ -0.19
LSM3	YLR438C-A	AZR1	P50080	613 aa		13.86	□□□□□ -0.19
LSM3	YLR438C-A	CUL3	P53202	744 aa		13.86	□□□□□ -0.19
LSM3	YLR438C-A	WHI2	P12611	486 aa		13.85	□□□□□ -0.19
LSM3	YLR438C-A	SDH2	P21801	266 aa		13.85	□□□□□ -0.19
LSM3	YLR438C-A	RPC25	P35718	212 aa		13.85	□□□□□ -0.19
LSM3	YLR438C-A	MPE1	P35728	441 aa	Known RBP	13.85	□□□□□ -0.19
LSM3	YLR438C-A	MIP6	P38760	659 aa	Known RBP	13.85	□□□□□ -0.19
LSM3	YLR438C-A	COS5	P47187	383 aa		13.85	□□□□□ -0.19
LSM3	YLR438C-A	UTP14	Q04500	899 aa	Known RBP	13.85	□□□□□ -0.19
LSM3	YLR438C-A	RLP24	Q07915	199 aa	Known RBP	13.85	□□□□□ -0.19
LSM3	YLR438C-A	APL1	P27351	700 aa		13.84	□□□□□ -0.19
LSM3	YLR438C-A	SCD6	P45978	349 aa	Known RBP RIP-Chip data	13.84	□□□□□ -0.19	not detected
LSM3	YLR438C-A	CUS1	Q02554	436 aa	Predicted RBP	13.84	□□□□□ -0.19
LSM3	YLR438C-A	SEC65	P29478	273 aa		13.83	□□□□□ -0.2
LSM3	YLR438C-A	MUD1	P32605	298 aa	Known RBP	13.83	□□□□□ -0.2
LSM3	YLR438C-A	TMT1	P32643	299 aa		13.83	□□□□□ -0.2
LSM3	YLR438C-A	SKG6	P32900	734 aa	Predicted RBP	13.83	□□□□□ -0.2
LSM3	YLR438C-A	VPS75	P53853	264 aa		13.83	□□□□□ -0.2
LSM3	YLR438C-A	TIM8	P57744	87 aa		13.83	□□□□□ -0.2
LSM3	YLR438C-A	MCM2	P29469	868 aa		13.82	□□□□□ -0.2
LSM3	YLR438C-A	VID24	P38263	362 aa		13.82	□□□□□ -0.2
LSM3	YLR438C-A	UBP5	P39944	805 aa		13.82	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms