RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	COQ4	O13525	335 aa		4.9	□□□□□ -1.63
YPT35	YHR105W	SRO9	P25567	434 aa	Known RBP	4.9	□□□□□ -1.63
YPT35	YHR105W	SLA2	P33338	968 aa		4.9	□□□□□ -1.63
YPT35	YHR105W	SNF7	P39929	240 aa	Known RBP	4.9	□□□□□ -1.63
YPT35	YHR105W	TY4A-J	P47023	414 aa		4.9	□□□□□ -1.63
YPT35	YHR105W	RSC58	Q07979	502 aa		4.9	□□□□□ -1.63
YPT35	YHR105W	DFG16	Q99234	619 aa		4.9	□□□□□ -1.63
YPT35	YHR105W	SEG2	P34250	1132 aa		4.89	□□□□□ -1.63
YPT35	YHR105W	NPP2	P39997	493 aa		4.89	□□□□□ -1.63
YPT35	YHR105W	TOK1	P40310	691 aa		4.89	□□□□□ -1.63
YPT35	YHR105W	YNL193W	P53870	558 aa		4.89	□□□□□ -1.63
YPT35	YHR105W	LPX1	Q12405	387 aa	Known RBP	4.89	□□□□□ -1.63
YPT35	YHR105W	PPH3	P32345	308 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	CDC11	P32458	415 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	ELM1	P32801	640 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	AIM26	P32858	118 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	DOM34	P33309	386 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	UGA2	P38067	497 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	YRO2	P38079	344 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	PIK1	P39104	1066 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	DSS1	P39112	969 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	ALG2	P43636	503 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	GPG1	P53130	126 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	ACM1	Q08981	209 aa		4.88	□□□□□ -1.63
YPT35	YHR105W	CDC9	P04819	755 aa		4.87	□□□□□ -1.63
YPT35	YHR105W	RAD53	P22216	821 aa		4.87	□□□□□ -1.63
YPT35	YHR105W	ABZ1	P37254	787 aa	Predicted RBP	4.87	□□□□□ -1.63
YPT35	YHR105W	CCZ1	P38273	704 aa		4.87	□□□□□ -1.63
YPT35	YHR105W	GYP8	P43570	497 aa		4.87	□□□□□ -1.63
YPT35	YHR105W	ORC3	P54790	616 aa		4.87	□□□□□ -1.63
YPT35	YHR105W	BI4	P03879	638 aa		4.86	□□□□□ -1.63
YPT35	YHR105W	RNQ1	P25367	405 aa		4.86	□□□□□ -1.63
YPT35	YHR105W	VBA3	P25594	458 aa		4.86	□□□□□ -1.63
YPT35	YHR105W	SFP1	P32432	683 aa		4.86	□□□□□ -1.63
YPT35	YHR105W	ENP1	P38333	483 aa	Known RBP	4.86	□□□□□ -1.63
YPT35	YHR105W	GEM1	P39722	662 aa		4.86	□□□□□ -1.63
YPT35	YHR105W	LCD1	Q04377	747 aa		4.86	□□□□□ -1.63
YPT35	YHR105W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
YPT35	YHR105W	SPC29	P33419	253 aa		4.85	□□□□□ -1.63
YPT35	YHR105W	PAF1	P38351	445 aa		4.85	□□□□□ -1.63
YPT35	YHR105W	TSL1	P38427	1098 aa	Known RBP	4.85	□□□□□ -1.63
YPT35	YHR105W	YJR120W	P47157	116 aa		4.85	□□□□□ -1.63
YPT35	YHR105W	HLJ1	P48353	224 aa		4.85	□□□□□ -1.63
YPT35	YHR105W	MTC3	P53077	123 aa		4.85	□□□□□ -1.63
YPT35	YHR105W	TPO2	P53283	614 aa		4.85	□□□□□ -1.63
YPT35	YHR105W	RTS3	P53289	263 aa		4.85	□□□□□ -1.63
YPT35	YHR105W	YGR283C	P53336	341 aa	Predicted RBP	4.85	□□□□□ -1.63
YPT35	YHR105W	RSB1	Q08417	382 aa		4.85	□□□□□ -1.63
YPT35	YHR105W	GAS1	P22146	559 aa	Known RBP	4.84	□□□□□ -1.63
YPT35	YHR105W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
YPT35	YHR105W	GIC1	P38785	314 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	SAH1	P39954	449 aa	Known RBP	4.84	□□□□□ -1.63
YPT35	YHR105W	MGS1	P40151	587 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	NIT1	P40447	199 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	YGR237C	P50089	785 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	FOL2	P51601	243 aa	Known RBP	4.84	□□□□□ -1.63
YPT35	YHR105W	PRP43	P53131	767 aa	Known RBP	4.84	□□□□□ -1.63
YPT35	YHR105W	FOL1	P53848	824 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
YPT35	YHR105W	THI73	Q07904	523 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	YOL057W	Q08225	711 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	NBA1	Q08229	501 aa	Known RBP	4.84	□□□□□ -1.63
YPT35	YHR105W	ENV7	Q12003	364 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	TMA17	Q12513	150 aa		4.84	□□□□□ -1.63
YPT35	YHR105W	ADE8	P04161	214 aa		4.83	□□□□□ -1.64
YPT35	YHR105W	SPS1	P08458	490 aa		4.83	□□□□□ -1.64
YPT35	YHR105W	SRD1	P09007	221 aa		4.83	□□□□□ -1.64
YPT35	YHR105W	MET13	P53128	600 aa		4.83	□□□□□ -1.64
YPT35	YHR105W	MDM38	Q08179	573 aa		4.83	□□□□□ -1.64
YPT35	YHR105W	SPA2	P23201	1466 aa	Known RBP	4.82	□□□□□ -1.64
YPT35	YHR105W	NUP145	P49687	1317 aa		4.82	□□□□□ -1.64
YPT35	YHR105W	RAD18	P10862	487 aa		4.82	□□□□□ -1.64
YPT35	YHR105W	ACE2	P21192	770 aa		4.82	□□□□□ -1.64
YPT35	YHR105W	MTC2	P34246	357 aa		4.82	□□□□□ -1.64
YPT35	YHR105W	UBP5	P39944	805 aa		4.82	□□□□□ -1.64
YPT35	YHR105W	HFM1	P51979	1187 aa		4.82	□□□□□ -1.64
YPT35	YHR105W	SRP1	Q02821	542 aa	Known RBP	4.82	□□□□□ -1.64
YPT35	YHR105W	UME1	Q03010	460 aa		4.82	□□□□□ -1.64
YPT35	YHR105W	SVS1	Q12254	260 aa		4.82	□□□□□ -1.64
YPT35	YHR105W	RIB2	Q12362	591 aa	Known RBP	4.82	□□□□□ -1.64
YPT35	YHR105W	GSY1	P23337	708 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	MRC1	P25588	1096 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	PCL2	P25693	308 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	REC104	P33323	182 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	EMC3	P36039	253 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	ETP1	P38748	585 aa	Known RBP	4.81	□□□□□ -1.64
YPT35	YHR105W	PMT3	P47190	753 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	GYP7	P48365	746 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	YKE2	P52553	114 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	SDA1	P53313	767 aa	Known RBP	4.81	□□□□□ -1.64
YPT35	YHR105W	SFB2	P53953	876 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	XYL2	Q07993	356 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	YDL177C	Q12257	170 aa		4.81	□□□□□ -1.64
YPT35	YHR105W	TYS1	P36421	394 aa	Known RBP	4.8	□□□□□ -1.64
YPT35	YHR105W	YBR238C	P38330	731 aa	Known RBP	4.8	□□□□□ -1.64
YPT35	YHR105W	GPP1	P41277	250 aa	Known RBP	4.8	□□□□□ -1.64
YPT35	YHR105W	PEX8	P53248	589 aa		4.8	□□□□□ -1.64
YPT35	YHR105W	ATP25	Q03153	612 aa		4.8	□□□□□ -1.64
YPT35	YHR105W	RSC3	Q06639	885 aa		4.8	□□□□□ -1.64
YPT35	YHR105W	MET7	Q08645	548 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms