RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W LCD1Q04377 747 aa7.66□□□□□ -1.18
SNU71YGR013W SCT1P32784 759 aa7.65□□□□□ -1.18
SNU71YGR013W VTC4P47075 721 aa7.65□□□□□ -1.18
SNU71YGR013W RKM2Q03942 479 aa7.65□□□□□ -1.18
SNU71YGR013W SSP2Q08646 371 aa7.65□□□□□ -1.18
SNU71YGR013W RMP1Q12530 201 aa7.65□□□□□ -1.18
SNU71YGR013W POL1P13382 1468 aa7.65□□□□□ -1.19
SNU71YGR013W FOB1O13329 566 aa7.64□□□□□ -1.19
SNU71YGR013W UGA3P26370 528 aa7.64□□□□□ -1.19
SNU71YGR013W HEM12P32347 362 aaPredicted RBP7.64□□□□□ -1.19
SNU71YGR013W DLD1P32891 587 aa7.64□□□□□ -1.19
SNU71YGR013W YRO2P38079 344 aa7.64□□□□□ -1.19
SNU71YGR013W MNN11P46985 422 aaKnown RBP7.64□□□□□ -1.19
SNU71YGR013W AIM14P53109 570 aa7.64□□□□□ -1.19
SNU71YGR013W UTP22P53254 1237 aaPredicted RBP7.64□□□□□ -1.19
SNU71YGR013W PAP2P53632 584 aaKnown RBP7.64□□□□□ -1.19
SNU71YGR013W RSC3Q06639 885 aa7.64□□□□□ -1.19
SNU71YGR013W STO1P34160 861 aaKnown RBP7.64□□□□□ -1.19
SNU71YGR013W MAL31P38156 614 aa7.64□□□□□ -1.19
SNU71YGR013W BIT2P38346 545 aa7.64□□□□□ -1.19
SNU71YGR013W FET4P40988 552 aa7.64□□□□□ -1.19
SNU71YGR013W PTK2P47116 818 aaKnown RBP7.64□□□□□ -1.19
SNU71YGR013W YGR283CP53336 341 aaPredicted RBP7.64□□□□□ -1.19
SNU71YGR013W YNR063WP53749 607 aa7.64□□□□□ -1.19
SNU71YGR013W SPP382Q06411 708 aaPredicted RBP7.64□□□□□ -1.19
SNU71YGR013W ATG33Q06485 197 aa7.64□□□□□ -1.19
SNU71YGR013W REH1Q06709 432 aa7.64□□□□□ -1.19
SNU71YGR013W YBR238CP38330 731 aaKnown RBP7.63□□□□□ -1.19
SNU71YGR013W ACA1P39970 489 aa7.63□□□□□ -1.19
SNU71YGR013W NDE1P40215 560 aa7.63□□□□□ -1.19
SNU71YGR013W TOK1P40310 691 aa7.63□□□□□ -1.19
SNU71YGR013W MNT3P40549 630 aa7.63□□□□□ -1.19
SNU71YGR013W SNU66Q12420 587 aaPredicted RBP7.63□□□□□ -1.19
SNU71YGR013W ADE8P04161 214 aa7.62□□□□□ -1.19
SNU71YGR013W HMG1P12683 1054 aa7.62□□□□□ -1.19
SNU71YGR013W MCM10P32354 571 aa7.62□□□□□ -1.19
SNU71YGR013W MCD4P36051 919 aa7.62□□□□□ -1.19
SNU71YGR013W PNT1P38969 423 aa7.62□□□□□ -1.19
SNU71YGR013W COG8Q04632 607 aa7.62□□□□□ -1.19
SNU71YGR013W MSS18P08593 268 aa7.62□□□□□ -1.19
SNU71YGR013W JNM1P36224 373 aa7.62□□□□□ -1.19
SNU71YGR013W HSE1P38753 452 aa7.62□□□□□ -1.19
SNU71YGR013W TAN1P53072 289 aaPredicted RBP7.62□□□□□ -1.19
SNU71YGR013W YDR338CQ05497 695 aa7.62□□□□□ -1.19
SNU71YGR013W PTC5Q12511 572 aa7.62□□□□□ -1.19
SNU71YGR013W TY2B-BQ12491 1770 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-HO13535 1793 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-DR5P0C2I2 1755 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-DR6P0C2I3 1755 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-LR2P0C2I5 1755 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-LR3P0C2I6 1755 aaKnown RBP7.61□□□□□ -1.19
SNU71YGR013W TY1B-PR1P0C2I9 1755 aaKnown RBP7.61□□□□□ -1.19
SNU71YGR013W TY1B-PR2P0C2J0 1756 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-PR3P0C2J1 1755 aaKnown RBP7.61□□□□□ -1.19
SNU71YGR013W TY1B-JR1P47098 1755 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-ML2Q03434 1755 aaKnown RBP7.61□□□□□ -1.19
SNU71YGR013W TY1B-ER1Q03612 1755 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-ML1Q04711 1755 aaKnown RBP7.61□□□□□ -1.19
SNU71YGR013W TY1B-GR2Q12269 1755 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-OLQ12273 1755 aa7.61□□□□□ -1.19
SNU71YGR013W TY1B-PLQ12414 1755 aaKnown RBP7.61□□□□□ -1.19
SNU71YGR013W CHL1P22516 861 aaPredicted RBP7.61□□□□□ -1.19
SNU71YGR013W DBP2P24783 546 aaKnown RBP7.61□□□□□ -1.19
SNU71YGR013W HOG1P32485 435 aa7.61□□□□□ -1.19
SNU71YGR013W BLI1P35727 113 aa7.61□□□□□ -1.19
SNU71YGR013W NPY1P53164 384 aa7.61□□□□□ -1.19
SNU71YGR013W SOG2Q08817 791 aa7.61□□□□□ -1.19
SNU71YGR013W YIG1Q08956 461 aa7.61□□□□□ -1.19
SNU71YGR013W NPP1P25353 742 aa7.6□□□□□ -1.19
SNU71YGR013W MRPL16P38064 232 aa7.6□□□□□ -1.19
SNU71YGR013W MSB3P48566 633 aaPredicted RBP7.6□□□□□ -1.19
SNU71YGR013W ECM9Q02202 377 aa7.6□□□□□ -1.19
SNU71YGR013W ATP25Q03153 612 aa7.6□□□□□ -1.19
SNU71YGR013W RKR1Q04781 1562 aa7.6□□□□□ -1.19
SNU71YGR013W TY1B-DR3Q99231 1755 aa7.6□□□□□ -1.19
SNU71YGR013W RPA190P10964 1664 aaKnown RBP7.6□□□□□ -1.19
SNU71YGR013W ESC1Q03661 1658 aaKnown RBP7.6□□□□□ -1.19
SNU71YGR013W PFK1P16861 987 aaKnown RBP7.6□□□□□ -1.19
SNU71YGR013W SIS1P25294 352 aaKnown RBP7.6□□□□□ -1.19
SNU71YGR013W CLA4P48562 842 aa7.6□□□□□ -1.19
SNU71YGR013W YDR056CQ12025 205 aa7.6□□□□□ -1.19
SNU71YGR013W MMS22Q06164 1454 aa7.59□□□□□ -1.19
SNU71YGR013W MRP10O75012 95 aa7.59□□□□□ -1.19
SNU71YGR013W REC104P33323 182 aa7.59□□□□□ -1.19
SNU71YGR013W APL2P36000 726 aaPredicted RBP7.59□□□□□ -1.19
SNU71YGR013W ERR3P42222 437 aa7.59□□□□□ -1.19
SNU71YGR013W QRI7P43122 407 aa7.59□□□□□ -1.19
SNU71YGR013W YGR153WP48238 217 aa7.59□□□□□ -1.19
SNU71YGR013W HAS1Q03532 505 aaKnown RBP7.59□□□□□ -1.19
SNU71YGR013W MET7Q08645 548 aa7.59□□□□□ -1.19
SNU71YGR013W GUP2Q08929 609 aa7.59□□□□□ -1.19
SNU71YGR013W NEW1Q08972 1196 aaKnown RBP7.59□□□□□ -1.19
SNU71YGR013W AIR2Q12476 344 aaKnown RBP7.59□□□□□ -1.19
SNU71YGR013W LTE1P07866 1435 aa7.59□□□□□ -1.19
SNU71YGR013W RPL11AP0C0W9 174 aaKnown RBP7.58□□□□□ -1.2
SNU71YGR013W COX11P19516 300 aaKnown RBP7.58□□□□□ -1.2
SNU71YGR013W CDC12P32468 407 aaKnown RBP7.58□□□□□ -1.2
SNU71YGR013W DID4P36108 232 aa7.58□□□□□ -1.2
SNU71YGR013W ARL1P38116 183 aaKnown RBP7.58□□□□□ -1.2
SNU71YGR013W ATG14P38270 344 aa7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms