RNA–Protein interactions for RNA: YGL111W

NSA1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene NSA1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSA1	YGL111W	YER158C	P40095	573 aa		4.96	□□□□□ -1.62
NSA1	YGL111W	GND2	P53319	492 aa		4.96	□□□□□ -1.62
NSA1	YGL111W	MUK1	Q02866	612 aa		4.96	□□□□□ -1.62
NSA1	YGL111W	WHI4	Q07655	649 aa	Known RBP	4.96	□□□□□ -1.62
NSA1	YGL111W	PPR1	P07272	904 aa	Predicted RBP	4.95	□□□□□ -1.62
NSA1	YGL111W	YKL151C	P36059	337 aa		4.95	□□□□□ -1.62
NSA1	YGL111W	SPC42	P36094	363 aa		4.95	□□□□□ -1.62
NSA1	YGL111W	GIC1	P38785	314 aa		4.95	□□□□□ -1.62
NSA1	YGL111W	HRQ1	Q05549	1077 aa		4.95	□□□□□ -1.62
NSA1	YGL111W	TMA46	Q12000	345 aa	Known RBP	4.94	□□□□□ -1.62
NSA1	YGL111W	LYP1	P32487	611 aa		4.93	□□□□□ -1.62
NSA1	YGL111W	IPL1	P38991	367 aa		4.93	□□□□□ -1.62
NSA1	YGL111W	SEN54	Q02825	467 aa	Predicted RBP	4.93	□□□□□ -1.62
NSA1	YGL111W	UPC2	Q12151	913 aa		4.93	□□□□□ -1.62
NSA1	YGL111W	YPL066W	Q12194	479 aa		4.93	□□□□□ -1.62
NSA1	YGL111W	RKM4	Q12504	494 aa		4.93	□□□□□ -1.62
NSA1	YGL111W	ALG7	P07286	448 aa		4.92	□□□□□ -1.62
NSA1	YGL111W	TRP2	P00899	507 aa	Known RBP	4.91	□□□□□ -1.62
NSA1	YGL111W	SDS3	P40505	327 aa		4.91	□□□□□ -1.62
NSA1	YGL111W	INO1	P11986	533 aa		4.91	□□□□□ -1.62
NSA1	YGL111W	MCM2	P29469	868 aa		4.91	□□□□□ -1.62
NSA1	YGL111W	ESF1	Q06344	628 aa	Known RBP	4.91	□□□□□ -1.62
NSA1	YGL111W	HBT1	Q07653	1046 aa	Known RBP	4.91	□□□□□ -1.62
NSA1	YGL111W	TRM13	Q12383	476 aa		4.91	□□□□□ -1.62
NSA1	YGL111W	RPC82	P32349	654 aa		4.9	□□□□□ -1.63
NSA1	YGL111W	YKL107W	P34251	309 aa		4.9	□□□□□ -1.63
NSA1	YGL111W	SED4	P25365	1065 aa		4.89	□□□□□ -1.63
NSA1	YGL111W	STE14	P32584	239 aa		4.89	□□□□□ -1.63
NSA1	YGL111W	MOT2	P34909	587 aa	Known RBP	4.89	□□□□□ -1.63
NSA1	YGL111W	MGE1	P38523	228 aa		4.89	□□□□□ -1.63
NSA1	YGL111W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
NSA1	YGL111W	SLD2	P34252	453 aa		4.88	□□□□□ -1.63
NSA1	YGL111W	ERG5	P54781	538 aa		4.88	□□□□□ -1.63
NSA1	YGL111W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
NSA1	YGL111W	SPR28	Q04921	423 aa		4.88	□□□□□ -1.63
NSA1	YGL111W	PEX2	P32800	271 aa		4.87	□□□□□ -1.63
NSA1	YGL111W	NPP2	P39997	493 aa		4.87	□□□□□ -1.63
NSA1	YGL111W	YGL176C	P46945	554 aa		4.87	□□□□□ -1.63
NSA1	YGL111W	SLU7	Q02775	382 aa	Known RBP	4.87	□□□□□ -1.63
NSA1	YGL111W	AFT2	Q08957	416 aa		4.87	□□□□□ -1.63
NSA1	YGL111W	DUT1	P33317	147 aa		4.85	□□□□□ -1.63
NSA1	YGL111W	SAH1	P39954	449 aa	Known RBP	4.85	□□□□□ -1.63
NSA1	YGL111W	DAS1	P47005	663 aa		4.85	□□□□□ -1.63
NSA1	YGL111W	TYW3	P53177	273 aa		4.85	□□□□□ -1.63
NSA1	YGL111W	SFB2	P53953	876 aa		4.85	□□□□□ -1.63
NSA1	YGL111W	MRH1	Q12117	320 aa	Predicted RBP	4.85	□□□□□ -1.63
NSA1	YGL111W	YHL017W	P38745	532 aa		4.84	□□□□□ -1.63
NSA1	YGL111W	SNF7	P39929	240 aa	Known RBP	4.84	□□□□□ -1.63
NSA1	YGL111W	FYV10	P40492	516 aa		4.84	□□□□□ -1.63
NSA1	YGL111W	YJR107W	P47145	328 aa		4.84	□□□□□ -1.63
NSA1	YGL111W	EEB1	Q02891	456 aa		4.84	□□□□□ -1.63
NSA1	YGL111W	RAI1	P53063	387 aa	Known RBP	4.83	□□□□□ -1.64
NSA1	YGL111W	IMO32	P53219	342 aa		4.83	□□□□□ -1.64
NSA1	YGL111W	HOF1	Q05080	669 aa		4.83	□□□□□ -1.64
NSA1	YGL111W	COQ11	Q05892	277 aa		4.83	□□□□□ -1.64
NSA1	YGL111W	FRE5	Q08908	694 aa		4.83	□□□□□ -1.64
NSA1	YGL111W	BNR1	P40450	1375 aa		4.82	□□□□□ -1.64
NSA1	YGL111W	HEM3	P28789	327 aa		4.82	□□□□□ -1.64
NSA1	YGL111W	GFA1	P14742	717 aa	Known RBP	4.81	□□□□□ -1.64
NSA1	YGL111W	CDC12	P32468	407 aa	Known RBP	4.81	□□□□□ -1.64
NSA1	YGL111W	PPS1	P38148	807 aa		4.81	□□□□□ -1.64
NSA1	YGL111W	SUT2	Q12286	268 aa		4.81	□□□□□ -1.64
NSA1	YGL111W	MET3	P08536	511 aa		4.8	□□□□□ -1.64
NSA1	YGL111W	POL32	P47110	350 aa		4.8	□□□□□ -1.64
NSA1	YGL111W	ICT1	Q12385	394 aa		4.8	□□□□□ -1.64
NSA1	YGL111W	YNL162W-A	Q3E7A8	72 aa		4.8	□□□□□ -1.64
NSA1	YGL111W	MDM10	P18409	493 aa		4.79	□□□□□ -1.64
NSA1	YGL111W	PPZ2	P33329	710 aa		4.79	□□□□□ -1.64
NSA1	YGL111W	GYP7	P48365	746 aa		4.79	□□□□□ -1.64
NSA1	YGL111W	SRP1	Q02821	542 aa	Known RBP	4.79	□□□□□ -1.64
NSA1	YGL111W	RMD1	Q03441	430 aa		4.79	□□□□□ -1.64
NSA1	YGL111W	SPO20	Q04359	397 aa		4.79	□□□□□ -1.64
NSA1	YGL111W	PEX19	Q07418	342 aa		4.79	□□□□□ -1.64
NSA1	YGL111W	YAP7	Q08182	245 aa		4.79	□□□□□ -1.64
NSA1	YGL111W	CDC34	P14682	295 aa		4.78	□□□□□ -1.64
NSA1	YGL111W	SEC21	P32074	935 aa	Known RBP	4.78	□□□□□ -1.64
NSA1	YGL111W	TDP1	P38319	544 aa		4.78	□□□□□ -1.64
NSA1	YGL111W	ELO3	P40319	345 aa		4.78	□□□□□ -1.64
NSA1	YGL111W	RRP15	Q06511	250 aa	Predicted RBP	4.78	□□□□□ -1.64
NSA1	YGL111W	YPR196W	Q06595	470 aa		4.78	□□□□□ -1.64
NSA1	YGL111W	TUB1	P09733	447 aa	Known RBP	4.78	□□□□□ -1.64
NSA1	YGL111W	CTF13	P35203	478 aa		4.78	□□□□□ -1.64
NSA1	YGL111W	RIX1	P38883	763 aa	Predicted RBP	4.78	□□□□□ -1.64
NSA1	YGL111W	DLT1	Q04216	342 aa		4.78	□□□□□ -1.64
NSA1	YGL111W	YLR225C	Q05948	407 aa	Known RBP	4.78	□□□□□ -1.64
NSA1	YGL111W	ADY4	Q05955	493 aa		4.78	□□□□□ -1.64
NSA1	YGL111W	ILV6	P25605	309 aa	Known RBP	4.77	□□□□□ -1.65
NSA1	YGL111W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
NSA1	YGL111W	YKR078W	P36158	585 aa	Known RBP	4.77	□□□□□ -1.65
NSA1	YGL111W	MET10	P39692	1035 aa		4.77	□□□□□ -1.65
NSA1	YGL111W	ATE1	P16639	503 aa		4.76	□□□□□ -1.65
NSA1	YGL111W	HCA4	P20448	770 aa	Known RBP	4.76	□□□□□ -1.65
NSA1	YGL111W	TMT1	P32643	299 aa		4.76	□□□□□ -1.65
NSA1	YGL111W	TRM11	Q12463	433 aa		4.76	□□□□□ -1.65
NSA1	YGL111W	TAH11	P47112	604 aa		4.75	□□□□□ -1.65
NSA1	YGL111W	FBP1	P09201	348 aa		4.74	□□□□□ -1.65
NSA1	YGL111W	VPS73	P53142	486 aa	Known RBP	4.74	□□□□□ -1.65
NSA1	YGL111W	NOT3	P06102	836 aa	Known RBP	4.73	□□□□□ -1.65
NSA1	YGL111W	CAF20	P12962	161 aa	Known RBP	4.73	□□□□□ -1.65
NSA1	YGL111W	FLO10	P36170	1169 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms